KEGG   Pseudomonas syringae pv. tomato DC3000: PSPTO_2538
Entry
PSPTO_2538        CDS       T00118                                 
Name
(GenBank) Rhs element Vgr protein
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
pst  Pseudomonas syringae pv. tomato DC3000
Pathway
pst03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pst00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    PSPTO_2538
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pst02044]
    PSPTO_2538
Secretion system [BR:pst02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   PSPTO_2538
SSDB
Motif
Pfam: Phage_GPD Phage_base_V DUF2345 DUF6484
Other DBs
NCBI-ProteinID: AAO56045
UniProt: Q882T4
Position
complement(2801756..2803798)
AA seq 680 aa
MQSEIISLPHFSLSLSDAHHDFQVFAFTGHEAISQPFCFKLDLVSEHTSLDLESLLGRSA
FLKFAPDGGGIHGLIDQIAQGESGRRLTHYSITLRPHLARLEHRTDQRIFQDLTVPQIIE
QVLEKHGLLATTFNFHLGTNYPKRDYCVQYGESDLHFIQRLCEEEGLHYHFEHSATAHQL
VFGDDQTVFPELGPVIYRQDTALAGTKPAIQHYRLRLETRPNSHHSRDYHFEKPLLITKG
SANVSRRIELQEYDYPGGFTSRDRGDHLAQRALERLNHDYLSGEGRSNQARLVSGHFLRL
SEHPNKEWNDLWLLTGVRHEGRQPRVLEESACEIQNPGDFHQGYRNTFTTTPWYALYRSP
LRHPKRRIFGSQTAVVTGPKGEEIHCDKHGRVKVQFHWDRDAEADDRSSCWLRVSSSWAG
NRYGGMTIPRVGMEVLVTFLEGDPDRPLVSGCLYHAEHVPPYDLPAHQTRSVFKTLSSPG
GGGSNELRIEDRAGQEQIYAHAQRNWDQNIKHDQKIRIGHERHDRVEANSYSEFKAQEHR
LVDGDRLTEAKADDHLRVGGTRHLKLGNALLAEAGQEIHLKSADKIVLEAGMELTFKVAG
SFIKIDASGVTVGGPAIHLNSGGSPGSGSGATPLLPGPTLRADTTKPGEVLAHAQRRAMR
RTPRCEVCEQQAAKKRSRNG
NT seq 2043 nt   +upstreamnt  +downstreamnt
atgcagtccgaaataatctcgctcccccacttcagtctgagcctttctgacgcccaccat
gactttcaagtcttcgccttcaccggtcacgaagccatcagccagcccttctgcttcaag
ctggatctggtcagcgagcacacttcgctggatcttgaaagtttgctggggcgctcagcg
ttcctaaagtttgcacccgacggcggtggaatccatggcctgatcgatcagattgcccaa
ggcgaatccggtcgacgtttgactcactattcgatcacgttgcgcccgcacctggcccgg
cttgagcatcgtactgatcagcgtatttttcaggacctgacggtgccccagatcattgaa
caggtacttgaaaagcacggcctgctggccaccacgttcaattttcatctaggaacgaac
tacccgaaacgcgattactgcgtgcaatacggcgagtctgacttgcacttcattcagcgg
ctgtgcgaagaagaaggcctgcactaccacttcgagcacagcgctaccgcccatcaactg
gtgtttggtgacgaccagacagtgttcccggaactgggcccggttatctacagacaggac
accgccctggcgggcacaaagccggccatccagcactacagactgcgcctggagacgcgc
cccaacagtcaccatagccgcgattaccatttcgagaagccgctgctgatcaccaaggga
tcggccaatgtcagtcgtcgtatcgagctccaggaatacgactacccgggcggcttcacc
agccgtgatcgtggcgatcatcttgcacaacgcgcgctggagcgcctcaatcacgattac
ctgtcaggtgaaggtcgcagtaaccaggctcggctcgtcagtggccattttctgaggctg
agcgaacatcccaacaaggaatggaatgatctgtggctgctgaccggcgttcgtcatgaa
ggccgtcagccgcgggtacttgaggagtccgcatgtgaaattcagaaccccggcgacttt
catcagggctaccgcaatacgttcactaccacgccttggtacgccttgtaccgctcgccc
ctgcgtcatcccaaacgaagaatcttcggcagtcagaccgccgtggtcacaggcccgaaa
ggtgaggaaatccactgcgacaaacacggtcgggtcaaagtgcagttccactgggatcgc
gacgctgaggccgatgaccggagcagttgctggttgcgcgtgtcatccagttgggcgggc
aatcgttatggcggcatgaccatcccgcgtgtcggtatggaagtgctggtaacgtttctt
gagggcgaccccgaccggccactggtcagtggctgcctgtaccacgccgagcacgtaccg
ccttatgacctgcccgcccaccagacgcgcagcgtattcaagaccttgagtagtccaggc
ggaggtggctcaaacgagctgcgtatcgaagacagggccggccaggagcaaatctatgct
cacgcccagcgcaattgggaccaaaacatcaaacatgatcaaaagatccgaattggtcat
gagcgtcatgaccgcgtggaagcaaacagctacagcgagttcaaggctcaggaacaccgt
ctggttgatggcgaccggctgactgaagccaaagcggacgaccatctgagggtaggtggg
actcggcacctgaaactgggtaatgcactgctggcagaggctgggcaggaaatccatttg
aagagtgccgacaagattgttctggaggctggcatggagctgacattcaaagtggctggc
agcttcataaagattgacgcaagcggcgtgacggtgggagggcctgccatccatttgaac
tccgggggaagcccgggcagtggctccggcgcaacccccttgctgccgggtccgacactg
cgagctgatacgaccaagcctggggaggttcttgcacatgcccagaggcgggccatgagg
cgcacgccacgttgtgaggtttgcgaacaacaggctgcgaaaaagaggtcgcgcaatgga
taa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (12)   

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