KEGG   Pseudomonas syringae pv. tomato DC3000: PSPTO_3262
Entry
PSPTO_3262        CDS       T00118                                 
Symbol
nirB
Name
(GenBank) nitrite reductase [NAD(P)H], large subunit
  KO
K00362  nitrite reductase (NADH) large subunit [EC:1.7.1.15]
Organism
pst  Pseudomonas syringae pv. tomato DC3000
Pathway
pst00910  Nitrogen metabolism
pst01100  Metabolic pathways
pst01120  Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:pst00001]
 09100 Metabolism
  09102 Energy metabolism
   00910 Nitrogen metabolism
    PSPTO_3262 (nirB)
Enzymes [BR:pst01000]
 1. Oxidoreductases
  1.7  Acting on other nitrogenous compounds as donors
   1.7.1  With NAD+ or NADP+ as acceptor
    1.7.1.15  nitrite reductase (NADH)
     PSPTO_3262 (nirB)
SSDB
Motif
Pfam: Pyr_redox_2 NIR_SIR Pyr_redox Fer2_BFD NIR_SIR_ferr Rubredoxin_C Pyr_redox_3 FAD_binding_2 DAO NAD_binding_8 AlaDh_PNT_C HTH_28
Other DBs
NCBI-ProteinID: AAO56740
UniProt: Q880B0
Position
3686459..3689020
AA seq 853 aa
MNTTVFPRTDVKTLIVVGNGMVGHHCVEQLIEGGALEHYRIHVFGEESQRAYDRVHLSEY
FTGRDAESLAMSEMALYEQAGLTLHLGVPVLEIDRGRHEIITAEGCFCYDKLILATGSYP
FVPPIEGAQGNSRLVYRTLEDLDTIRYAASKAKRGVVVGGGLLGLEAANALKSLGLEAHV
VEFAPRLMPVQLDEHGGAALKARIEALGVGVHLSRATQSISDGKQYRYRMNFANDEFLET
DLIVFSAGIRPQDSLARQCALELGPRGGVAIDEHCRTSDADIYAIGECAAWNGSVFGLVA
PGYQMARGVAAQLCGKETDAFFGADMSTKLKLLGVDVGSIGDAHGALAGAVSYRFIDEAS
GSYRRLVVSADGKQVLGAVLVGDNSYYDTLLQYAQNGITLPADPSSLILPRGEGAPTLGA
DALPATATICSCHNVSKGSICSAIDNGCTDLAGIKACTKAATGCGGCTALLKQVFEHELI
ARGVAVDKSLCEHFAYTRQELYSIVRVEGIESFDELLDRHGKGAHGCDICKPAVGSILAS
CWNRPITEPSLVPLQDTNDTFMANMQKNGTYSVVPRIPGGEITPDGLIAIGAVAKKYDLY
TKITGGQRIDLFGAQLHELPDIWSELIAAGFETGHAYGKSTRTVKSCVGSTWCRYGVQDS
VAMALRIEDRYKGLRSPHKLKFAVSGCTRECAEAQSKDVGVIATENGWNLYLCGNGGMRP
RHAELFATDLDDETLIRYIDRFLMLYIRTADKLQRTSVWRKTLEGGLDYLKAVILDDSLG
LAAELESQMQLVVDRYECEWANALKDPEKLKRFRTFVNDGRSDPDVHFVKERAQRRPAKP
EELALIPLFKEVV
NT seq 2562 nt   +upstreamnt  +downstreamnt
atgaacaccacagtcttcccccgcactgatgtaaaaaccctgatcgtcgtcggtaatggc
atggtcggtcatcattgcgtcgagcagttgatcgaaggcggcgcgcttgagcattatcgt
attcacgttttcggcgaggagtctcagcgtgcctatgatcgtgtgcacctgtccgagtat
ttcaccgggcgcgatgccgaatcgctggccatgagtgaaatggccttgtacgagcaagcc
ggcctcaccttgcacctgggcgtaccggtgctggagatcgaccgtggccgtcacgagatc
attaccgcagaaggctgtttctgttacgacaaactgatcctggccaccggttcctatccg
ttcgtgccgcctatcgaaggcgcgcagggtaattcccggctggtctaccgcaccctcgaa
gacctggacaccattcgttacgccgcctctaaagcaaaacgcggcgtggtggttggtggt
ggcttgctggggctggaggcggccaatgcgttgaagtcactcggccttgaagcccatgtc
gtcgaatttgccccgcgcctgatgccggtgcagctggacgagcacggcggtgccgcgctg
aaagcgcgcatcgaagcgttgggggtcggtgtgcatctgtcccgcgccacgcaatcgatc
agcgacggcaagcaatatcgctatcggatgaattttgccaacgacgaatttctggaaacc
gatctgatcgtgttttccgccggtattcgtccgcaggattcgctggcccggcagtgcgcg
ctggaactcggcccgcgcggcggtgttgccatcgacgaacactgccgcaccagcgacgcc
gatatctatgcaattggcgaatgcgcggcctggaacggcagtgtgttcggtctggttgcc
cccggctatcagatggcccgtggcgtggcagcgcagttgtgcggaaaagaaaccgacgcg
ttcttcggcgccgacatgtccaccaagctcaaactgctgggcgtagacgtgggctctatc
ggtgatgcgcacggtgcgctggccggggccgtaagctatcgctttatcgacgaggccagc
ggcagttacaggcgcctggtggtgtcggccgacggcaagcaggtgctcggcgctgtgctg
gtcggcgacaacagttattacgacacactgctgcagtacgcgcagaacggcatcaccctg
ccagccgacccgtccagcctgatcctgccgcgtggcgaaggtgcgccgacgctgggcgcc
gatgccctgcccgccacagcgaccatctgttcctgtcataacgtcagcaaaggctcgatc
tgttcagccatcgacaatggctgcaccgacctggccgggatcaaggcctgcaccaaggcc
gccaccggttgcggcggctgtacggcgctgctcaagcaggtgttcgaacatgaactgatt
gcccgtggcgtggcggtggacaagagcctctgcgaacacttcgcctacacccgccaggag
ttgtactcgatcgtgcgcgtcgaaggcatcgaaagcttcgatgaactgctggatcggcac
ggcaagggcgcgcatggctgcgacatctgcaagcctgcggtcggctcgattctcgcctca
tgctggaaccgtccgatcaccgagccttcgctggtgccattgcaggacaccaacgacacg
ttcatggccaacatgcagaaaaacggcacttactcggtcgtgccgcgcattccaggtggc
gaaatcacccccgacgggttgatcgcgattggcgcggtggccaagaaatacgacctgtac
accaagatcaccggcggccagcgtatcgatctgtttggcgcgcaattgcacgagttgcca
gacatctggagcgagttgatcgccgccggtttcgagaccgggcatgcctacggtaaatcg
acccgcacggtgaagtcctgcgtcggcagcacctggtgccgctatggcgtgcaggacagc
gtcgccatggcgttacgcatcgaagatcgttacaagggcctgcgttcgccacacaaactc
aagttcgcagtgtccggctgcacccgcgaatgcgccgaagcacagagcaaggacgttggt
gtgatcgccaccgagaatggctggaacctgtacctgtgcggcaacggcggcatgcgcccg
cgccacgccgagctgttcgccactgatctggatgacgagaccctgatccgttacatcgac
cgcttcctgatgctctacatccgcaccgccgacaagctgcagcgcacctcggtgtggcga
aaaacactggaaggtggcctggactacctcaaagcggtgattctcgatgacagcctgggc
ctggcagccgagcttgaatcgcagatgcaactggtggtggatcgctacgagtgcgagtgg
gccaatgccctcaaggacccggaaaaactcaagcgcttccgcaccttcgtcaacgacggg
cgcagcgaccccgacgtgcacttcgtcaaggaacgcgctcagcgtcgcccggcaaaacct
gaagaactggcgcttattccgttgttcaaggaggtggtgtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (4)   
   KEGG PATHWAY (3)   
   KEGG MODULE (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (12)   
   Pfam (12)   
All databases (31)   

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