KEGG   Pseudomonas syringae pv. tomato DC3000: PSPTO_3840
Entry
PSPTO_3840        CDS       T00118                                 
Symbol
rluC
Name
(GenBank) ribosomal large subunit pseudouridine synthase C
  KO
K06179  23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
Organism
pst  Pseudomonas syringae pv. tomato DC3000
Brite
KEGG Orthology (KO) [BR:pst00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pst03009]
    PSPTO_3840 (rluC)
Enzymes [BR:pst01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.24  23S rRNA pseudouridine955/2504/2580 synthase
     PSPTO_3840 (rluC)
Ribosome biogenesis [BR:pst03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    PSPTO_3840 (rluC)
SSDB
Motif
Pfam: PseudoU_synth_2 S4
Other DBs
NCBI-ProteinID: ABK79683
UniProt: A0PCI6
Position
complement(4345595..4346551)
AA seq 318 aa
MTNIAPPTPGVQLVEVAPELAGQRIDNFLITYLKGVPKTLIYRILRKGEVRVNKGRIKPE
YKLQAGDIVRIPPVRVPERDEPVPVAQALLQRLEAAIVYEDKALIVLNKPAGIAVHGGSG
LSFGVIEAFRQLRPDAKELELVHRLDRDTSGLLMIAKKRSMLRHLHEALRGDGVDKRYMA
LVRGNWATAQKQVRAPLLKSNLRSGERMVEVNEEGKEALTLFKVLRRFGDFATMVEAKPV
TGRTHQIRVHTLHAGHAIAGDTKYGDESFSREIRDLGGKRLFLHAYMLTVPMPDGSKLNV
QAPVDEMWAKTVERLSAT
NT seq 957 nt   +upstreamnt  +downstreamnt
atgacgaatattgcccctccaacccccggcgttcagctggttgaggttgcgccggaactt
gccggtcaacgcatcgataattttctgatcacttatctcaagggtgtgcccaagaccttg
atttaccgcattttgcgcaaaggcgaagtgcgtgtgaacaagggccggatcaagcccgaa
tataagttgcaggcaggcgatatcgtgcgcattccccctgtgcgcgtgcctgagcgcgac
gagcccgtgccggttgcgcaggcgctgttgcagcgcctcgaggcggcgattgtctacgaa
gacaaggcgctgatcgtgctcaacaagcctgcgggcattgctgtgcacggtggcagcggc
ctcagtttcggcgtgatcgaagccttccgccagctgcgcccggacgccaaggagcttgaa
ctggtgcatcgcctcgatcgcgacacctcgggcctgctgatgattgccaagaagcgcagc
atgctgcgtcacctgcacgaagccctgcgtggcgacggtgtcgacaaacgttacatggca
ctggttcgcggcaactgggccacggcgcaaaagcaggtgcgcgcaccattgctcaagagc
aatctgcgctccggcgagcggatggtcgaagtcaacgaggaaggcaaggaggcgctgacg
ctcttcaaggtgctgcgtcgtttcggcgacttcgccacgatggtcgaggccaagccggtg
accgggcgtactcaccagatccgcgtgcacacactgcacgccggtcatgccatcgcgggc
gacacaaagtacggcgacgagagtttcagtcgtgagattcgcgatctgggcggcaagcgt
ctgtttctgcatgcctatatgctgaccgtgccgatgcctgatggcagcaaattgaatgtg
caggcacccgtcgacgagatgtgggcaaagacagtggagcgtctgagtgcaacgtga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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