KEGG   Pseudomonas syringae pv. tomato DC3000: PSPTO_5420
Entry
PSPTO_5420        CDS       T00118                                 
Name
(GenBank) conserved protein of unknown function
  KO
K11893  type VI secretion system protein ImpJ
Organism
pst  Pseudomonas syringae pv. tomato DC3000
Pathway
pst02025  Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:pst00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    PSPTO_5420
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pst02044]
    PSPTO_5420
Secretion system [BR:pst02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   PSPTO_5420
SSDB
Motif
Pfam: T6SS_VasE STN1_2
Other DBs
NCBI-ProteinID: AAO58842
UniProt: Q87U87
Position
complement(6161765..6163096)
AA seq 443 aa
MKSHKVIWQEGMLLRPQHFQHNDRYYDHQMKTRTQLLGSYTWGFLSLDIDLQFLNMGKLV
ISHASGILPDGSLFELGGNTEPLALDVPPNTGNTPIYLALPLVTGNHIESRRPEQSDVLA
RYTAYEAEVSDSNAGDDSSSQVSCGRPDFKLLLGQQQSDQAYVKLKVCEVLDTTPDGVIS
LDPDFVPTYIQAHASSYLLSCLKEVISMLSHRGDTIADRIRSNGKVGGAEVGDFMMLQLI
NRTELLLRHYLDLEQVHPEELYRTLLTMLGDLATFSSDSKRPRLDSRYQHSDQGASFRKL
MEAIRQVLSMVLEQHAIELVLQARQYGIIVSPLHDHKLLGSASFVLAASANCDSEELRHR
LPAHLKVGPVERIRQLVNLHLPGIKVKPLPVAPRQIAFHTNKTYFILELSSEDLAQLERS
GGFAFHVSGEFAELELKFWAIRN
NT seq 1332 nt   +upstreamnt  +downstreamnt
atgaaatcccataaagtcatttggcaggaaggcatgttgctgcgcccgcagcacttccag
cacaacgatcgctactacgatcaccagatgaaaacccgtacccagttattggggagctac
acgtggggttttctgagtctggacatcgacctgcagtttctcaatatgggcaaactggtg
atcagccatgcgtcgggaatcctgccggatggcagcctgttcgagttggggggcaacact
gagccgctggcgctcgatgtgccgcccaatacgggtaatactccgatctatctcgcgctg
ccgctggtcacgggtaaccacattgagtcgcgccgccccgagcaatctgatgtgctggcg
cgctataccgcctacgaggctgaggtgtccgactccaacgctggcgatgactcctcgagt
caggtcagttgtggtcgtcccgacttcaagctgttgcttggccagcagcaaagcgatcag
gcttacgtgaagctgaaggtttgcgaagtactcgacacgacgccggatggcgtaatcagc
cttgatcccgattttgtaccgacctacatacaggctcacgcttccagctacctgctgtct
tgcctcaaggaagtcatcagcatgctcagccaccggggcgacaccatcgctgaccggatc
cgttccaacggcaaggtagggggtgccgaagtcggcgacttcatgatgctgcaactgatc
aaccgtaccgagttgctgctgcgtcactatctggaccttgaacaggtgcaccctgaagag
ttgtatcgcacgctgctgaccatgcttggcgatctggcgacgttttcgagcgatagcaag
agaccgcgtctggacagccgctaccagcacagcgatcagggagccagcttccgcaagctg
atggaggcgatccgtcaggtgctgtcgatggtgctggaacagcacgccatcgaactggtt
ctacaggcgcgtcagtacggcatcatcgtatcgcctctgcatgatcacaagctgttggga
tcggcgtcgttcgttctggcagccagcgcaaattgcgactccgaggaactgcgtcaccgt
ttgccagcgcacctcaaggtcggtcctgtggagcgtatccgccaactggtcaaccttcat
ctgcctggtatcaaggtcaagccattaccggtggccccgcggcagattgcgttccatacc
aacaaaacctatttcatcctcgaactcagttccgaagatctggcgcaactcgagcgctcc
ggcggcttcgcgttccatgtgtccggcgaattcgccgagcttgaactgaaattctgggct
atcaggaactga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (5)   

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