KEGG   Pseudomonas syringae pv. tomato DC3000: PSPTO_5435
Entry
PSPTO_5435        CDS       T00118                                 
Symbol
hcp-2
Name
(GenBank) secreted protein Hcp
  KO
K11903  type VI secretion system secreted protein Hcp
Organism
pst  Pseudomonas syringae pv. tomato DC3000
Pathway
pst02025  Biofilm formation - Pseudomonas aeruginosa
pst03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pst00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    PSPTO_5435 (hcp-2)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    PSPTO_5435 (hcp-2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pst02044]
    PSPTO_5435 (hcp-2)
Secretion system [BR:pst02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   PSPTO_5435 (hcp-2)
SSDB
Motif
Pfam: T6SS_HCP
Other DBs
NCBI-ProteinID: AAO58857
UniProt: Q87U73
Position
6181106..6181624
AA seq 172 aa
MATPAYMSITGTKQGLITAGAFTADSVGNTYQEGHEDQVMVQGFSHELIIPRDPQSGQPT
GQRVHKPVKITKVFDKSSPLLLAALTSGERLTEITIQWYRTSAAGTQEHYYTTKLEDAII
VDIKDYMHNCQDPANAHFTHLEDVEFTYRKITWTHEVSGTSGSDDWRSPVAG
NT seq 519 nt   +upstreamnt  +downstreamnt
atggctacgccagcgtacatgtccatcaccggcaccaaacaaggcctgatcaccgccggt
gccttcactgctgactcggtcggcaacacctaccaggaaggtcacgaagaccaagtgatg
gttcagggcttcagccacgaactcatcatcccgcgtgacccgcagtcgggccaacctacc
ggtcagcgcgtccacaagccggtcaagatcaccaaagtgttcgacaagtcctcgcctctg
ctgctggcagcactgacctctggcgagcgtctgaccgaaatcaccatccagtggtaccgc
acctcggctgccggcactcaagagcactactacaccaccaagcttgaagacgcgatcatc
gttgacatcaaggactacatgcacaattgccaagacccggcgaacgcgcatttcacccat
ttggaagacgtagaattcacctaccgcaaaatcacttggacccacgaagtatccggtact
tcgggttccgatgactggcgttccccggtcgctggctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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