KEGG T00118: PSPTO

Pseudomonas syringae pv. tomato DC3000: PSPTO_B0066

Entry

PSPTO_B0066 CDS T00118

Gene name

traU-1

Definition

(RefSeq) traU protein

K12206

intracellular multiplication protein IcmB [EC:7.2.4.8]

Organism

pst Pseudomonas syringae pv. tomato DC3000

Brite

KEGG Orthology (KO) [BR:pst00001]
09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pst02044]
    PSPTO_B0066 (traU-1)
Secretion system [BR:pst02044]
Type IV secretion system
  Icm/Dot secretion system protein
   PSPTO_B0066 (traU-1)

SSDB

Motif

Pfam:

RsgA_GTPase NACHT AAA_10

Other DBs

NCBI-GeneID:

1187444

NCBI-ProteinID:

NP_808651

UniProt:

Q88BS2

Position

pDC3000B:53554..56610

AA seq 1018 aa
MPSLIRWVEDLITETSRFAVSRDLPDYCDLNTVLRLTDDDRTRHPALNAPYVLVNDDGDY
CSVYAVAGSFCDTDEAAPLEAPYSWAGRLERMMHALTAHYRRHGHKISLVFDDDPDRGRE
DVERLLAPQYASVKRTGIDLTPILDENVEKLAPWVSRERCYLVCYTGRKTLSAHELIDEN
RRIKQLIGQSPDARYGQNPVLAEMAGLKIRHDAFMSAVEAAFKDDGQGVLLELLDAHAVG
QALRSQVDRLGTSEHWYPLLPDDPITPHGVRNGDDHTPFLAPQLKFQLMNQDMETNGNKL
CVNGMWHGTLSVVLGPQTPQTFAKLKALVPRGVPWRVRMDLMPGGMKSLGMKKGTLDFMA
FVPPLRPIWNSIETLTKVEQQEPVCVMTIMASTWGDSQAAVTRHLTLLTQAFQAWGVCEV
TQTFGNPVRAWASTLVASSKGSGPNLLYPPLSEALNLLPLTRPASAWEEDGNALFATLDG
KLYPVGLATPKQNKLTSVVTGSSGQGKSVLLNKLGNVTVSSAQQRLPFMAGVDKGFSMQG
QVALLRDSLPPERKDEVVGIVLQNSPKHCRNLFDIQLGARFPIAPERNWIISMLTAMCID
PSTGNPPNERDTRQILDRVISMAYTANAEKSPRRWGRGVVPEVDTALDKSGLIERYPAQW
WDSSTWYEVRDLLFEAGFVKEAQLAQFEAVPELADMTTFLNHEDVQSAYGRVQRDGSQEL
LLEYLHRCMTDACREFKMLAGRTQFLISPRTRVIAIDLNNVMGDNTTNAGHLKTGIMFLF
AGQVAGGDFVLPQYRDELLEAVPTLYHPMHLDRLEQLDQEVKTKIYDELHNAKQVPFIFP
MLETQDREQRKFGIRTVLSSQYVSDFPDAILNSANSLYMMEVDPKDEKLLTDTIKVPKVT
LQRFQRLGSGPAADGSGVPFLGVFRIKGGGTLARILKNAMGPLELWALGSSPTDSALRRL
LYDAVGGATARAILAEAFPQGTAEKLIALRQKQAGEADSNNVIGTLANELIKRRGYNI

NT seq 3057 nt +upstreamnt +downstreamnt
atgccgagcttgatccgttgggttgaagacctgatcacagaaacctcccggtttgccgta
tcacgcgatctgcccgactattgcgacttgaacacggtactgcgtctgacggacgacgat
cgcactcgccacccagccctcaatgccccgtatgtactggtcaacgacgatggcgattac
tgctcggtgtatgccgttgccggcagtttttgtgacaccgacgaagcggcacccctggag
gccccttattcctgggccggccgcttggagcgcatgatgcatgcgctgacagcccactat
cgccgacatggacacaaaatcagcctggtgttcgatgatgaccctgatcgaggccgcgag
gacgtcgaacgcctgctggcccctcagtacgcttctgtcaaaaggaccggcatcgacttg
acgccgatcctggacgaaaacgttgaaaagctggccccctgggtttcgcgcgaacgctgc
tacctggtgtgttacaccgggcgcaagacgctctcggcgcatgaactgattgacgaaaat
cgccgtatcaagcaattgatcgggcaaagcccggatgcacggtatggacaaaatccggtc
ctggctgaaatggccggcctgaaaattcgccacgacgccttcatgagcgctgtggaagct
gcctttaaagatgacggccagggtgtgctgctggaactgctcgatgcccatgcagtgggc
caggcgctgcgctctcaagtggaccggctcggtaccagtgagcattggtacccgctgctc
cctgatgatccgatcaccccgcacggtgtacgtaacggcgacgatcacacaccgtttctg
gccccgcagctgaagtttcagctgatgaaccaggacatggaaaccaacggcaacaagctc
tgcgtcaatgggatgtggcatgggaccttgtctgtagtcctggggccgcagacgccgcag
acctttgccaagctcaaagcgctggtccctcgcggcgtgccttggcgcgtacgcatggac
ctgatgcctggaggcatgaagtcgctgggcatgaaaaaaggcacgttggacttcatggcg
tttgtgccgccgcttcgccccatctggaactccatcgaaacgttgacgaaagtcgagcag
caggagccggtgtgtgtcatgacgatcatggcatcgacctggggagacagccaggccgca
gtgacgcgccatctgacgctgctgacccaggcctttcaggcctggggggtgtgcgaggtg
acgcaaaccttcggcaacccggtacgcgcatgggcctcgacgctggtggcttccagcaaa
ggcagtggcccgaacctgttgtatccgccgctttcagaggcgctgaacctgttgccgctg
acccgccctgcctcggcttgggaggaggacggcaacgccttgttcgctacgctcgatggc
aagctctatccggtcggtctggccacccccaagcagaacaagctcaccagtgtggtcacc
ggctcttccggccagggcaagtcggtgctgctgaacaagctgggcaatgtcacggtgtcc
agcgcccagcagcgattaccgttcatggcgggggtggacaaaggtttctcgatgcaaggt
caagtcgccttgctgcgcgacagtctgccgccggagcgtaaggacgaggtggtgggcatt
gtgctgcagaacagccccaagcattgccggaacctgttcgatatccagctgggcgcgcgg
tttccgatcgcccccgagcgtaactggatcatcagcatgctcacggccatgtgcattgat
ccctctaccggcaatccgccaaacgaacgcgatacccggcaaatactggaccgcgtcatc
agcatggcctataccgccaatgccgaaaaaagccccagacgctgggggcgcggggtcgtc
cccgaagtggacactgccttggataaaagcgggttgatcgagcgctatccggcccagtgg
tgggatagcagtacctggtatgaggtgcgcgatctgttgtttgaagcaggctttgttaag
gaagcgcagctggcccagttcgaagcggtgccggaactggccgacatgaccaccttcctg
aaccatgaagatgtacagagcgcctatggtcgggtgcaacgcgatggcagtcaggagctg
ttgctggagtacttgcaccgatgcatgactgacgcctgtagagaattcaagatgctggcc
gggcgtacgcagttcttgatcagtccacgcacgcgagtgatcgcgatcgatctgaacaat
gtcatgggtgataacaccaccaatgctggccacctgaaaaccggaatcatgttcctgttt
gcgggccaggtggcggggggagattttgtgttgccgcaataccgggatgagctgttggag
gcggtgcccacgctttaccaccccatgcatctcgaccgcttggagcagctggatcaggag
gtcaaaaccaagatctacgacgagctgcacaatgcgaaacaggtgcccttcatctttccc
atgctggaaacccaggaccgtgagcaacgcaaattcggcatacgcacggtgttgtcctcg
cagtacgtgagcgactttcccgacgccattctgaattcggccaactcgctgtacatgatg
gaagtggaccccaaagacgagaagcttctgaccgacaccatcaaagtgcccaaggtcact
ctgcagcgctttcagcgtttgggctcaggtccagcagcggatggcagcggcgtaccgttt
ttgggcgtgttccgaatcaagggtggcggcaccctggcgcgcattctgaaaaacgccatg
ggccccctggagctatgggcgttgggctcttcaccgaccgacagcgccctgcgcaggttg
ctatatgacgccgtcggcggtgccacggctcgcgccatcctggccgaagcctttccccag
ggcacggcagaaaaactcatcgcgctgcgccagaagcaagcgggtgaagcggattccaat
aacgtgattggcacgctggccaacgagttgatcaaacggcgcggctacaacatttga

All links

Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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