KEGG   Providencia stuartii BE2467: BGK56_05045
Entry
BGK56_05045       CDS       T04734                                 
Name
(GenBank) ribonuclease E
  KO
K08300  ribonuclease E [EC:3.1.26.12]
Organism
psta  Providencia stuartii BE2467
Pathway
psta03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:psta00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BGK56_05045
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:psta03019]
    BGK56_05045
   03009 Ribosome biogenesis [BR:psta03009]
    BGK56_05045
Enzymes [BR:psta01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.12  ribonuclease E
     BGK56_05045
Messenger RNA biogenesis [BR:psta03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     BGK56_05045
Ribosome biogenesis [BR:psta03009]
 Prokaryotic type
  rRNA processing factors
   BGK56_05045
SSDB
Motif
Pfam: RNase_E_G RNase_E_G_Thio S1 PNPase_C
Other DBs
NCBI-ProteinID: APG50352
Position
1054928..1058179
AA seq 1083 aa
MKRMLINATQQEELRVALVDGQRLYDLDIESPGHEQKKANIYKGKITRIEPSLEAAFVDY
GAERHGFLPIKEIAREYFPSNYHSQGRPNIKDVLKEGQEVIVQVDKEERGNKGAALTTFI
SLAGSYLVLMPNNPRAGGISRRIEGEDRTELKEALSSLEIPDGMGLIVRTAGVGKSAESL
QQDLLYRLRHWEAIKKAAENRPAPFLIHQESNVIVRAFRDYLRPDIGEILIDNPKVVEMA
RNHIEAIGRGDFASKIKYYSGDVPLFSHYQIESQIESAFQREVRLPSGGALVIDTTEALT
AIDINSSRSTRGGDIEETAFNTNLEAADEIARQLRLRDLGGLIVIDFIDMTPVRHQREVE
NRLREAVRQDRARIQIARISRFGLLEMSRQRLSPSLGESSHHVCPRCSGTGTIRDNESLS
LSVLRLIEEEALKENTHEVHAIVPVQIASYLLNEKRKAVSEIETRQRNVRVVIVPNDQMQ
TPHFHVIRIRKGEEVNTLSYNLAHYHETETLNSTEDPAAERKAPEQPAISAFALQEPVEQ
PVTVKSKENKARTETPKQGVKVDAQPSFFSKVAEFFKKLFAGEEEKVAEKPAEKSRQNSG
NDKRRNNERRNNRRNNRRDRDENSDNRENRDNRSNRNAQSDEANNRKGRNNKNANQQDEQ
NVDSNSREAQQQQRREQRAERRRRQDEKRQQQAAKAQQEAVQGADNTPVEKEEPQARPVT
PRRQRRQLTQKIRITDNVEAVAQEDEVVKVATAVENDAMPIAALPAPTHVDEQVAEVNSS
EQQDVQVANQEDKQDTIIPRRSRRSPRHLRVSGQRRRRYRDERHLTKSPMPLFAAVASPE
LASGKVFISYPVVQPQQETIAIMTNEEMLEQQGIVSVEAVETTDITSSQVIEQANETVET
VAIEPVETVTETNVNLVAESADEHAVSLEPAIAPQAEPAVVHTEQALEDTQPEPVVETAP
TVEPKAPVAVIEDVVIEQPKVEPTAEIAEQDDQPQTSTDAVEEPKAEAVEVPYVAKSTVI
VASKAARHAYSPMTKAPAPEVVESTFEIKVYQREASTFVSKGAGGHVATNYATSQMAKPA
HFE
NT seq 3252 nt   +upstreamnt  +downstreamnt
atgaaaagaatgctaataaacgcgactcaacaggaagagttgcgtgttgcccttgttgac
gggcaacgactctatgatctggatatcgaaagtccaggtcatgaacaaaaaaaagcgaat
atttacaaaggaaaaataactcgcatcgaaccaagtcttgaagctgcttttgttgattat
ggtgctgaaagacacggtttcctccctatcaaagagatcgctcgcgaatacttcccaagc
aattaccactctcaaggccgccccaatatcaaagatgtccttaaggaaggccaagaagtt
atcgttcaggttgataaagaagagcgtggcaataaaggtgccgcactcaccacgtttatc
agcttagcgggaagttatttagtactgatgccaaataacccgcgtgcgggtggtatttct
cgccgtattgaaggtgaagatcgtacagaattaaaagaagcgctctcctcccttgagatc
ccggatgggatggggttgattgttcgcaccgcgggcgtgggtaaatccgcagaatcttta
caacaagatttgctctaccgcttacgccactgggaagctatcaaaaaagcggctgaaaac
cgccctgctccgttcttaatacaccaagaaagtaacgtcattgttcgtgcgttccgtgac
tatttacgcccagatatcggcgaaatccttatcgataacccgaaagtggtcgaaatggca
cgtaaccatattgaagcgattggccgtggtgattttgccagcaaaatcaaatattatagc
ggtgatgttccgctatttagccattatcaaatcgaatcacaaattgaatctgccttccaa
cgtgaagtacgccttccatctggtggtgcattagtgattgataccaccgaggcgttaacg
gctatcgatatcaactcttcacgctcaacacgcggcggagacattgaagagaccgcattt
aatacaaaccttgaagcggccgatgagatcgcacgtcaattacgtctgcgtgaccttggt
ggcttaattgttatcgactttatcgatatgacgccagtcaggcatcaacgtgaagttgaa
aaccgcctacgtgaggccgtgcgtcaagaccgtgcacgtattcaaatcgcccgtatctcg
cgtttcggtttattagagatgtcgcgccagcgtttaagcccatcattaggtgaatctagc
caccatgtgtgccctcgttgttcgggtacaggaaccatccgtgataatgaatcattgtct
ctttctgttttgcgtcttattgaagaagaagcattaaaagagaatacacatgaagttcat
gctatcgttccggtacaaattgcttcctatctacttaacgaaaagcgtaaagcagtcagc
gaaatcgaaacgcgtcaacgcaatgttcgcgtggtcattgtgccaaacgaccaaatgcaa
acgcctcattttcacgtgatccgtattcgtaaaggtgaagaagtaaatacgctgagctat
aacttagctcactaccatgaaacggaaaccttaaacagtacggaagatccagcggctgaa
cgtaaagcccctgagcaaccagctatctctgctttcgcgttacaagagcctgtagaacag
cctgttactgttaagtctaaagagaacaaagcgcgcactgaaacaccaaaacaaggggtt
aaagtggatgcccagccgagcttttttagcaaggtagctgaattcttcaaaaaactcttt
gctggtgaagaagaaaaagttgctgaaaaacctgctgagaaaagtcgccaaaatagcggt
aacgacaagcgccgtaacaatgaacgccgcaataatcgtcgtaataatcgccgtgatcgt
gatgaaaacagtgacaaccgcgaaaatcgcgataatcgttctaaccgtaatgcgcaatct
gacgaagctaacaatcgtaaaggccgcaataataagaacgctaatcagcaagatgagcaa
aacgttgatagcaatagccgtgaagcgcagcaacagcagcgccgcgaacaacgtgctgaa
cgccgtcgccgtcaagatgaaaaacgtcaacaacaagcagctaaggcacaacaagaggca
gttcaaggtgctgataatacacctgtagagaaagaagagcctcaagcgcgccctgttacg
cctcgtcgtcaacgtcgtcaattgacacaaaaaattcgtatcactgataacgttgaagcc
gtagcgcaagaagatgaagtggttaaagttgcaactgccgttgaaaatgatgctatgcct
atcgcagcactccctgctccgactcatgttgatgagcaagtggctgaggtaaatagctca
gaacaacaagatgttcaagttgctaaccaagaagataagcaagataccatcattccacgt
cgctcacgtcgttcaccacgtcacctacgtgtcagtggtcagcgtcgtcgtcgttaccgt
gatgagcgtcatctgacaaaatcaccaatgcctctgttcgctgccgtagcctcacctgag
ttagcatcaggtaaggtgtttatcagctatcctgttgttcaaccacaacaagaaaccatc
gctatcatgaccaatgaagagatgcttgagcaacaaggtattgttagtgtagaggccgtt
gaaaccaccgatatcacatcttctcaagtcatcgagcaggctaatgaaacggttgaaact
gtcgctatcgaaccagtagaaaccgtcactgaaaccaacgttaatcttgtggctgaatcc
gcagatgagcatgcagtttctcttgaacctgccattgccccacaagctgaaccggctgtc
gttcatacagagcaagctctagaagacactcaaccagagcctgttgttgaaacggcacca
accgttgaacctaaagcaccggtcgcggtcattgaagacgttgtaattgagcaacctaaa
gtggagcctacagcagagatagccgaacaagatgatcagccgcaaaccagcacagatgca
gttgaagagcctaaggctgaagctgttgaagtgccttatgtagcgaaatcaacggttatt
gttgcaagtaaggcagcacgtcatgcttactcaccaatgaccaaagcaccagcgcctgaa
gtggtcgaatcaacattcgaaatcaaggtttaccagcgtgaagcctcaacctttgtcagt
aaaggtgccggtgggcatgtagcaaccaattatgcgacatcacaaatggcaaaaccggct
cattttgaatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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