KEGG   Paenibacillus stellifer: PSTEL_24175
Entry
PSTEL_24175       CDS       T03335                                 
Name
(GenBank) DNA-directed RNA polymerase subunit beta
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
pste  Paenibacillus stellifer
Pathway
pste03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:pste00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    PSTEL_24175
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pste03021]
    PSTEL_24175
   03400 DNA repair and recombination proteins [BR:pste03400]
    PSTEL_24175
Enzymes [BR:pste01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     PSTEL_24175
Transcription machinery [BR:pste03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     PSTEL_24175
DNA repair and recombination proteins [BR:pste03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      PSTEL_24175
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_2 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpb2_45 RNA_pol_Rpb2_1
Other DBs
NCBI-ProteinID: AIQ65738
UniProt: A0A089M2K4
Position
complement(5032795..5036340)
AA seq 1181 aa
MAGHLVQYGRRTRRSYARINEVLEVPNLIEIQQKSYDWFLEEGLREMFQDISPIQDFTGN
LVLEFIDYSLGEPKYTVDDAKERDVTYAAPLRVKVRLINKETGEVKEQEVFMGDFPLMTE
TGTFIINGAERVIVSQLVRSPSVYFSTKVDKNGKKTYTATVIPNRGAWLELETDAKDIMY
VRIDRTRKIPVTVLLRALGFGTDAEILDLLGNDEYIRNTLDKDNTDSTEKALIEIYERLR
PGEPPTLDNAKSLLVARFFDPKRYDLANVGRYKINKKLHIKNRLFNQRLAQPLVDESTGE
ILAETGQMVDRRLLDELIPYFEKSMAAKTYRVSGGVLDNEDIPLQMVEVFSPIEEGRVVK
LIANGNIDKSVKHITQADIISSISYFINLLHGIGNTDDIDHLGNRRLRSVGELLQNQFRI
GLSRMERVVRERMSIQDANAITPQALINIRPVIASIKEFFGSSQLSQFMDQTNPLAELTH
KRRLSALGPGGLTRERAGFEVRDVHHSHYGRMCPIETPEGPNIGLINSLSTFARINEYGF
IEAPYRWVDPKTGKVTEQIDYLTADEEDNYVVAQANAELTEEGSFKDEMVIVRYNKLSDN
ITTMPSSRVDYMDVSPKQVVSVATALIPFLENDDSNRALMGSNMQRQAVPLLIPKAPLVG
TGMEHKSAKDSGVCIVSKYDGIIERSSANEIWLRRVETVDGKEVKGDIVKYKLHKFMRSN
QGTCINQRPLAKRGDIVKKGDILADGPSTEMGELALGRNVVVAFMTWEGYNYEDAILLSE
KLVKEDVYTSIHIEEYESEARDTKLGPEEITRDIPNVGEEALRNLDERGIIRIGAEISAG
DILVGKVTPKGVTELTAEERLLHAIFGEKAREVRDTSLRVPHGSDGIIVDVKVFTRENGD
ELPPGVNQLVRVYIAQKRKISEGDKMAGRHGNKGVVARILPEEDMPFLPDGTPVQVVLNP
LGVPSRMNIGQVLEVHLGFAAMRLGIHVATPVFDGARENDVFDTMEEAGMQRNGKTILYD
GRTGERFEREVTVGVMHMIKLAHMVDDKIHARSTGPYSLVTQQPLGGKAQFGGQRFGEME
VWALEAYGAAYTLQEILTVKSDDVVGRVKTYESIVKGENVPEPGVPESFKVLIKELQSLG
MDVKILSGDEQEIEMKELDDEDETTSDKLSLNLEGAEVGVE
NT seq 3546 nt   +upstreamnt  +downstreamnt
ttggcaggacatcttgttcagtatggtcgacgcactcggcgaagctatgcgagaattaac
gaggtactcgaggtcccgaacctgattgagatccaacaaaaatcatacgattggtttttg
gaggaaggattgcgtgaaatgtttcaggacatctcgccgatccaggatttcacgggcaat
ctggtgctggagttcattgactacagcttaggcgaaccgaaatatacggtggacgatgcc
aaagaacgcgacgttacgtatgcggcgccgcttcgggttaaagttcgtctcattaacaag
gaaaccggcgaggtcaaggaacaggaagtgttcatgggggatttcccgctgatgacggag
accggtacgtttatcattaacggtgcggaacgggtaattgtcagccagttggttcgctct
ccaagcgtctactttagcactaaagtggataagaacggtaagaaaacctacacggccaca
gtaatccctaaccgcggcgcatggctggaattggagaccgatgcgaaggacatcatgtat
gtccgtatcgaccgtacccgcaaaattccggttaccgtgctgcttcgcgctcttggtttc
ggcacggatgccgaaattctggatctgcttggcaatgatgaatatatccgcaataccctg
gataaagacaacaccgactcgacggaaaaggcgcttatcgagatttacgaacgtctccgc
ccgggcgagccgccgacactcgacaacgcgaagagcttgctggtagcacgtttcttcgac
cccaagcgttatgatctggcgaatgtgggtcgctataagattaacaagaagctgcacatc
aagaatcgcctgttcaaccagcgtctggctcagccgctcgtagacgagtcgaccggtgaa
attctggccgaaaccggccagatggtagaccgccgtctccttgacgagctgatcccgtac
ttcgagaagagcatggcagccaagacctaccgcgtaagcggcggtgttctggataacgaa
gacattccgctgcaaatggttgaagtcttctcgccaatcgaagaaggccgtgtcgtcaag
ctgattgcgaacggcaatatcgacaaatcggtcaagcatattacccaggctgatattatt
tcctcgatcagctactttatcaacttgcttcacggcatcggcaacactgacgatatcgac
catctgggcaaccgtcgtctgcgttcggtgggcgaactgctccagaaccagttccgtatc
ggtctgtcccgtatggagcgcgttgtccgtgaaagaatgtcgattcaggatgccaatgcc
attacgccgcaggccctgatcaacattcgtccggtcattgcgtcgatcaaggagttcttc
ggatcttcccagctgtcccagttcatggaccagacgaacccgctggccgagcttacacat
aagcgccgtctctccgcgctgggtccaggcggtctgacgcgcgaacgcgcgggctttgaa
gttcgagacgtccatcacagtcactatggccggatgtgtccaattgaaacgcctgaaggt
ccgaacatcggtcttatcaactccctgtcgacatttgcccgcatcaacgaatacggcttt
atcgaagcaccgtaccgttgggtggatccgaagaccggtaaggttacggaacagatcgat
tatctgacggccgatgaagaagataattatgttgtcgcccaggcgaacgctgagctgacg
gaggaaggctcgtttaaggacgaaatggttatcgtccgttacaacaagctctccgacaat
atcacgacgatgccgagcagtcgggtagactacatggacgtatcgcctaagcaggttgta
tccgtcgcgacggcgctcattccgttccttgagaacgatgactccaaccgcgcgctgatg
ggttccaatatgcagcgtcaggcagttccactgctcatcccgaaagcccctctggtcggt
acgggaatggagcacaagtcggccaaggattcgggcgtatgtattgtatccaagtacgac
gggattatcgaacgctcgtcggccaacgagatttggctgcgccgcgtcgaaaccgtcgac
ggcaaagaagttaaaggcgacattgttaaatataaattacacaaatttatgcgttcgaac
caagggacctgcattaaccagcgtccactggccaaacggggcgacatcgtcaagaagggc
gacatcctggcggacggtccttcgaccgaaatgggtgaattggcactggggcgcaacgta
gtcgttgccttcatgacctgggaaggctacaactacgaggatgcgatcctgctgagcgag
aagcttgtgaaagaggatgtatacacttcgattcacatcgaggagtacgaatccgaagcg
cgcgatacgaaactcggaccggaagaaattacacgcgacattccgaacgtgggcgaagaa
gcgctccgcaacctggatgagcgcggtattatccggatcggcgccgaaatcagcgctgga
gacatcctggtcggcaaggttacgccgaagggtgtaacggagctgacggctgaagaacgc
ctgctgcacgccatcttcggcgagaaggcccgcgaagtccgcgacacctcgctgcgcgtg
ccacacggcagtgacggtatcatcgttgacgttaaagtgttcacgcgggagaacggcgac
gagctgcctccaggcgttaaccaactcgtccgcgtctacatcgcccagaagcgcaaaatc
tccgaaggcgacaagatggctggacgtcatggtaacaagggtgtcgtagcacgtatcctg
ccggaagaagatatgccgttcctgccggacggtacgcctgtacaggttgtactgaatccg
ctgggcgtaccttcgcgtatgaacatcggacaggtgcttgaggttcacctcggcttcgcg
gccatgcgcctgggcattcacgtggcaacgccggtattcgacggagcacgcgagaatgac
gtattcgacacgatggaagaagccggcatgcagcgcaacggcaagaccatcctgtatgac
ggacgcacgggcgagcgcttcgagcgcgaagttaccgtcggcgtcatgcacatgatcaag
ctggcgcacatggttgacgataaaatccatgcccgttccacagggccatactcgctcgtt
acgcagcagccactcggcggtaaagcccagttcggcggccagcgcttcggggaaatggaa
gtatgggcgcttgaagcttacggcgccgcttataccctgcaggagattctgacagtcaaa
tccgacgacgtggtcggccgtgtgaagacctacgaatcgatcgttaagggcgagaacgtg
ccggaaccgggcgttccggaatccttcaaggtattgatcaaggagcttcaatccctcggc
atggacgttaagattctgagcggagacgagcaggagatcgagatgaaggaactggacgat
gaggatgagactacaagcgacaagctgagcctcaatctggaaggtgcggaagtcggagtg
gaataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (17)   

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