KEGG   Phreatobacter stygius: E8M01_32575
Entry
E8M01_32575       CDS       T05955                                 
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pstg  Phreatobacter stygius
Pathway
pstg03410  Base excision repair
pstg03430  Mismatch repair
pstg03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pstg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    E8M01_32575 (recJ)
   03430 Mismatch repair
    E8M01_32575 (recJ)
   03440 Homologous recombination
    E8M01_32575 (recJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pstg03400]
    E8M01_32575 (recJ)
DNA repair and recombination proteins [BR:pstg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     E8M01_32575 (recJ)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     E8M01_32575 (recJ)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      E8M01_32575 (recJ)
SSDB
Motif
Pfam: RecJ_OB DHHA1 DHH
Other DBs
NCBI-ProteinID: QCI68552
UniProt: A0A4D7BLF1
Position
complement(6894576..6896378)
AA seq 600 aa
MINPRRLFLGVEQSVLGRAWRDRLDDPARAQALAIAQVHDLPDILSRVLAGRGVIADGVE
AYLEPTVKAAMPDPSVLTDMDRAVERLVHAVVTTERVAIFGDYDVDGATSSAVLALFLRA
AGLDPVIRIPDRIFEGYGPNSEAIRQLRADGATLLVTLDCGTTSHEVLAEAGRIGFDVVV
CDHHQADETLPAVAALVNPNRLDDLSGLGHLCAAGVTFMMVVALNRALRQRGFWTTGRPE
PDLMRLTDLVALGTIADVVPLKGLNRAFVARGLAVMRKRDNVGLRALMDVAKLDGPPTPY
HLGFLIGPRINAGGRIGDAGLGARLLVTDDALEAQRIAAELDRLNRERQVVELGTVAEAE
AEALAALGPMEEGTAVIVTAGNGWHAGVVGLVASRLKERFKRPAFAVAFTGDIGTGSGRS
LPGVDLGAVVRQAVSEGLLAKGGGHAMAAGITVMRGRLADFRAFLETKLEASVATARKQD
ALAIDAATTAAAIKPELAALIDRAGPFGSGNAEPVLVLPAHTIVYAEEVGTAHVRTRLKS
GDNATVDAIAFRAAGQPVGLALAEHRGRQLHVAGSISIDRWQGRERVQFRILDVAVPGRG
NT seq 1803 nt   +upstreamnt  +downstreamnt
atgatcaacccgcggcggctgttcctcggggttgaacaatcggtcctcggtcgcgcctgg
cgcgaccggctggacgatccggcccgcgcccaggcgctggcgatcgcccaagtccatgac
ctgccggacatcctgtcgcgggtgctggccggccgcggcgtcatcgccgatggcgtcgag
gcctatctcgagccgaccgtcaaggcggccatgccggacccctcggttctgaccgacatg
gaccgggcggtcgaacggctcgtccacgcggtggtgacgaccgagagggtcgcgatcttc
ggcgattacgacgtcgacggcgcgacgtcctcggcggtgctggcgctgttcctgcgcgcc
gccggcctcgacccggtcattcgcatacccgaccgcattttcgagggttatggcccgaac
agcgaggccatccggcaattgcgcgccgacggcgcgacgctgctggtgacgctcgattgc
ggcacgaccagccacgaggtgctggcggaggctggccggatcggcttcgacgtggtggtc
tgcgaccaccaccaggccgatgaaacgctgccggcggttgccgccctggtcaatcccaac
cgcctcgacgatctctccggccttggccatctctgcgccgccggcgtcaccttcatgatg
gtggtggcgctgaaccgggcgctcaggcaacgcggcttctggacgaccggacggccggag
ccggacctgatgcggcttaccgacctggtggcgctcggcaccattgccgacgtggtgccg
ctgaaagggctcaaccgcgccttcgtggcgcgcgggctcgcggtcatgcgcaagcgcgac
aatgtcggcctgcgcgcgctgatggacgtcgccaagctcgacggcccgccgacgccttat
catctcggcttcctcatcggcccgcgcatcaatgccggcgggcggatcggcgatgccggc
ctcggcgccaggctcttggtcaccgacgatgccctggaggcccagcggatcgccgccgag
ctcgaccggctgaaccgcgagcgccaggtggtggaactcggcaccgtcgccgaagccgag
gccgaggcgctggcggcgcttggcccgatggaggagggcaccgcggtcatcgtcaccgcc
ggcaacggctggcatgccggcgtcgtcggcctggtcgcctcgcgcctgaaggaacggttc
aagcggccggccttcgcggtggccttcaccggcgacatcggcaccggatccggccggtca
ctgccgggcgtcgacctcggcgccgtggtgcgccaggcggtcagcgaagggctcctggcc
aagggcggcggccacgccatggcggccggcatcaccgtgatgcgcggtcggctggcggat
tttcgcgcctttctcgaaaccaagctggaggcgagcgtcgcgaccgcccgcaagcaagat
gcgctggcgatcgacgcggcaaccaccgccgccgcgatcaagcccgagctcgccgccctg
atcgaccgcgccggaccgttcggctcgggcaatgccgagccggtgctggtgctgccggcc
catacgatcgtttatgccgaggaggtggggaccgcccatgtccgcacccggctgaagagc
ggcgacaatgccaccgtcgacgccatcgcctttcgcgccgccgggcagccggttggcctg
gcgctggccgaacaccgtggccggcagctgcatgtcgccggctcgatctcgatcgatcgc
tggcagggccgggaacgggtgcagttccggatcctggacgtggcggttcccggacgcgga
tga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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