KEGG   Pantoea stewartii subsp. stewartii: DSJ_05290
Entry
DSJ_05290         CDS       T04970                                 
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
  KO
K06176  tRNA pseudouridine13 synthase [EC:5.4.99.27]
Organism
pstw  Pantoea stewartii subsp. stewartii
Brite
KEGG Orthology (KO) [BR:pstw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pstw03016]
    DSJ_05290
Enzymes [BR:pstw01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.27  tRNA pseudouridine13 synthase
     DSJ_05290
Transfer RNA biogenesis [BR:pstw03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    DSJ_05290
 Prokaryotic type
    DSJ_05290
SSDB
Motif
Pfam: TruD
Other DBs
NCBI-ProteinID: ARF48814
UniProt: H3RGT1
Position
1086310..1087350
AA seq 346 aa
MTLQYLHGVPGATGVIKARPEDFEVKEDLGYRPDGEGEHVLVRIRKTGANTRFVAEALAK
FMKIPARDLSYAGMKDRHAVTEQTLCFRVPGNAMPNLTGFASEGVEILEVVRHKRKLRVG
ALAGNAFRLTIRQVSQRDDIEARLKQIRERGVPNYFGEQRFGRNGNNLQTALKLARQEIQ
IRDRNKRGLMLSAARSALFNQVTSLRLQQQGSLTQVMNGDALQLTGRGSWFVAQPEEREA
LQARVDQHALRITAPLPGKGEAGPQGDALAFEEHCLADAVELRALLVRERVEASRRAMLV
VPRDLHWQWLDDATLTLQFWLPAGSFATSVVRELVITDDTADLPDE
NT seq 1041 nt   +upstreamnt  +downstreamnt
atgacgttgcagtacctccacggtgtgcctggcgcgacgggcgtaattaaagcccgcccg
gaagacttcgaggtgaaggaagacctggggtaccgccctgacggtgaaggtgagcatgtg
ctggtgcgcattcgtaaaacgggtgccaatacgcgttttgttgccgaagccctggcaaaa
tttatgaaaattcctgcccgcgacctcagttatgccggcatgaaagaccgccacgccgtg
accgagcaaacactctgcttccgtgtgccgggcaatgcgatgcccaacctgacaggcttt
gcatcagaaggcgtcgaaatccttgaggttgtgcgtcataagcgcaaattgcgcgtcggc
gcgctggccggaaacgcctttcggttgaccatacgacaggtcagccagcgcgatgacatc
gaggcccgccttaagcagattcgtgaacgcggtgtgcctaattactttggcgagcaacgc
tttgggcgcaacggcaacaatctgcagacggcgttgaaactggcgcgtcaggaaatccag
atacgtgaccgcaataaacgtggcctgatgctctctgctgcacgtagtgcgttattcaat
caggtcaccagtctgcgtttgcagcagcagggtagcctgactcaggtcatgaacggggat
gcattgcagcttaccgggcgtggcagttggtttgtcgcccagcccgaggaaagggaggcg
ttgcaggcgcgcgtggatcagcatgcgttgcgtatcacggcacccttgcccggaaaaggc
gaggcggggccacagggcgacgcgctggcgttcgaagagcactgtctggcggatgcggta
gaactgcgcgcgctgctggtgcgtgaacgggtggaggccagccggcgtgccatgctggtg
gtgccgcgcgatttgcactggcagtggctggatgacgccaccctgacgttgcagttctgg
ttaccggcgggcagctttgccaccagcgtggtcagagagctggtcatcactgacgacaca
gcggatttacctgacgaataa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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