KEGG   Pantoea stewartii subsp. stewartii: DSJ_15105
Entry
DSJ_15105         CDS       T04970                                 
Name
(GenBank) 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF
  KO
K11392  16S rRNA (cytosine1407-C5)-methyltransferase [EC:2.1.1.178]
Organism
pstw  Pantoea stewartii subsp. stewartii
Brite
KEGG Orthology (KO) [BR:pstw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pstw03009]
    DSJ_15105
Enzymes [BR:pstw01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.178  16S rRNA (cytosine1407-C5)-methyltransferase
     DSJ_15105
Ribosome biogenesis [BR:pstw03009]
 Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    DSJ_15105
SSDB
Motif
Pfam: Methyltr_RsmB-F YebU_pre-PUA_dom Methyltr_RsmF_N Methyltranf_PUA Methyltransf_31 Cons_hypoth95 Methyltransf_25 TRM GntR
Other DBs
NCBI-ProteinID: ARF51947
UniProt: A0A7U5JHN7
Position
3050578..3051960
AA seq 460 aa
MRQSLPDEASLQQFIDISQQPLRRSLRVNTLKISVSAFLAQTAHYGWQLTPVPWCEDGFW
ISREDESLPLGSVAEHLSGLFYIQEASSMLPVTALFDACPDAQHFMDMAAAPGSKTTQIA
ARMHNQGIVLANEFSSSRVKVLHANITRCGVTNTALTHFDARVFGPALPEQFDAILLDAP
CSGEGVIRKDADALKNWSLASTHDIAQTQRDLIDSAFHALKPGGTLVYSTCTLNPIENQQ
VVAWLLARYPAAVEVAPLTTLFPGAEQAATPEGYLHVFPQLFDSEGFFVARLRKTASVER
LPAPTYKVGKLPFTPVNRKLENDIVQAAAKVALQWDERLQLWQRDKEIWLFPADIVPLLG
QVRFSRIGLKLAETFAKGYRWQHEAVVALASPRPAQTVELNEAEAEAWFRGRDIYPENPP
TIDEMIVTYQAQPLGLAKRVGSRIKNSYPRELVRDGRLFR
NT seq 1383 nt   +upstreamnt  +downstreamnt
atgcgccagagcctgcccgatgaggccagcctgcagcagtttatcgacatcagccagcag
ccgttacgccgcagcctgcgagtcaatacgttaaaaatcagcgtcagcgcgtttctggcc
caaacggctcactacggctggcagcttacgccggttccgtggtgtgaagacggcttctgg
atcagccgggaggatgaaagtttaccgttgggtagcgtggcagagcatctgagtggcctg
ttttatattcaggaagccagctcgatgctgccggtgacggcgctgtttgatgcctgtccc
gatgcgcagcatttcatggatatggcggccgcccccggctcgaaaacaacacagattgcc
gcccggatgcacaaccagggaattgtccttgctaatgagttctcttccagccgggtaaaa
gtgctgcacgcgaacattacccgctgtggcgtgaccaataccgcgctgactcactttgac
gcccgcgtctttgggcctgcactgccggaacagttcgatgcgatcctgctggatgcgccc
tgctctggcgaaggcgtgatacgtaaagatgcggatgcgctgaaaaactggtcgcttgcc
agcacccacgatatcgcccagacccaacgcgatctgattgacagcgcgtttcatgccctg
aagcctggcggtacgctggtgtactccacctgcacactcaatccgatcgaaaaccaacag
gttgtggcctggctgctggcgcgctaccccgcagccgtcgaggttgcgccgctgacgacg
ctgtttccaggcgcagaacaggcagccacgcccgaaggttacctgcacgtctttcctcag
ctgtttgacagtgaaggcttctttgtcgcgcggttacgcaaaaccgcctctgttgagcgg
ctgcctgcgccgacatacaaagtcggcaagctcccgtttacccccgtaaaccgcaaactg
gaaaacgatattgttcaggcggccgcgaaggtggcgcttcagtgggatgaacgcctgcaa
ctgtggcaacgcgataaagaaatttggctgtttcccgccgacatcgttccgctgttagga
caggtccgtttctcgcggattggcctgaaactggctgaaacctttgcgaagggttatcgc
tggcaacatgaggccgttgtcgcgctggcgtcaccgcgtccagcgcagacagtggaactg
aatgaggcggaagcggaagcgtggtttcgcggtcgcgatatctaccctgaaaacccgccc
accattgatgagatgattgtgacctatcaggctcagccgctggggctggcaaaacgggtt
ggtagccggattaaaaacagctatccgcgcgaactggtgcgcgacggtcggctgttccgt
taa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (18)   

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