KEGG   Pseudarthrobacter sulfonivorans: AU252_02120
Entry
AU252_02120       CDS       T04210                                 
Name
(GenBank) ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
psul  Pseudarthrobacter sulfonivorans
Brite
KEGG Orthology (KO) [BR:psul00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:psul03016]
    AU252_02120
Enzymes [BR:psul01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     AU252_02120
Transfer RNA biogenesis [BR:psul03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    AU252_02120
SSDB
Motif
Pfam: DNA_pol_A_exo1 DNA_pol_A_exoN HRDC PIN_10
Other DBs
NCBI-ProteinID: ALV40104
UniProt: A0A0U3PCX1
Position
476422..477750
AA seq 442 aa
MTPHIPENTTAGAPAADTTPHITVEGFDSQVPVVIDLDAPRDGVPLVIETQSGLERCAAA
IAAGTGPAGVDAERASGFRYGQRAFLVQIRREGSGTWLIDPEPFENLSIINDALQGVEWI
LHAASQDLPCLLELGMWPDRLFDTELAARLAGLPRVGLAAVIEQLLGFGLAKEHSAADWS
TRPLPEPWLRYAALDVEVLTELREELIELLQADGKLEYAEQEFAAILAAGVAPPRVDPWR
KTSGLHQIRDRRQLAAVREMWLERDSLAQKRDVAPGRLIPDSALVSAAKAMPSTVPQLLG
TKGFHGRAAQREAPRWLRCIAAARDLEDLPPLHLPTNAPPPPRVWSDRDPEAAARLSTAR
PLLQEKAEELNLPVENLLTPDYLRRVAWRPPSGITEETVAAELRALGAREWQIGVVAPLL
TDAFLNPQPLPAKETKATAVPE
NT seq 1329 nt   +upstreamnt  +downstreamnt
atgacccctcatattccggaaaacaccacggccggcgctccggctgctgataccactccc
cacatcacggtggaaggcttcgacagccaggtccccgtagtcattgacctcgatgcaccg
cgcgacggcgtgccgctggttatcgaaacgcagtccgggctggagcggtgcgcggcagcc
atcgccgccggaacagggcccgcaggggttgatgcagaacgggcctcaggattccggtac
ggccagcgcgcgttcctggtgcaaatccggcgcgaaggctccggtacctggctgatcgat
cctgaaccgttcgagaacctgtccatcatcaacgatgcgctccagggcgtggaatggatc
ctgcatgcagccagccaggacctgccctgtctgctggagctgggcatgtggccggacagg
ctctttgatacggagctcgccgcacggctggccggcctaccacgcgttggcctggccgcc
gtcatcgaacagctgctcgggtttggcctggcgaaggaacattctgccgccgactggtcc
acccggccgctgcccgagccgtggctgcgatacgccgccctggacgtggaagtcctgacc
gaactgcgcgaagaactcatcgaactgctgcaggccgacggcaagctggaatacgccgag
caggaatttgccgcgatccttgccgccggagtcgcccctccccgggttgacccctggcgc
aagacgtcgggcctgcaccagatccgcgaccggcgccagctggccgcggtccgcgaaatg
tggctggagcgcgattccctggcgcagaagcgcgatgtggcgccgggacggctgatccca
gattccgccctggtgtccgccgccaaggccatgccgtccaccgttccccaactcctcggc
accaagggcttccacgggcgtgcggctcagcgtgaggcaccccgctggctccggtgcatc
gccgctgcccgcgatcttgaggaccttccgccgctgcacctgcctaccaacgcaccgccc
ccgccgcgggtgtggtccgatcgggaccccgaggccgccgcacgcctgtccaccgcccgt
ccgctcctgcaggagaaggcggaggaactgaaccttcccgtggagaacctgctgacgccg
gactacctgcgccgcgtggcgtggcgcccgccgtcgggcattaccgaagaaacagtggcc
gccgagctgcgtgccctcggtgcgcgtgagtggcagatcggcgtggtggcaccgcttctc
acggacgcgttcctcaacccgcaaccgctgccggccaaggaaaccaaggcaactgcagtc
cccgagtaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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