KEGG   Pseudomonas sp. VLB120: PVLB_05185
Entry
PVLB_05185        CDS       T02897                                 
Symbol
rnc
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
psv  Pseudomonas sp. VLB120
Brite
KEGG Orthology (KO) [BR:psv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:psv03019]
    PVLB_05185 (rnc)
   03009 Ribosome biogenesis [BR:psv03009]
    PVLB_05185 (rnc)
   03036 Chromosome and associated proteins [BR:psv03036]
    PVLB_05185 (rnc)
Enzymes [BR:psv01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     PVLB_05185 (rnc)
Messenger RNA biogenesis [BR:psv03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     PVLB_05185 (rnc)
Ribosome biogenesis [BR:psv03009]
 Eukaryotic type
  90S particles
   RNase
    PVLB_05185 (rnc)
 Prokaryotic type
  rRNA processing factors
   PVLB_05185 (rnc)
Chromosome and associated proteins [BR:psv03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     PVLB_05185 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm
Other DBs
NCBI-ProteinID: AGZ33844
UniProt: A0AA86ABH0
Position
1176370..1177059
AA seq 229 aa
MSASLTRLERKLGYTFKNQEQMLLALTHRSYAGRNNERLEFLGDAILNFVVGEALFERFP
QAREGQLSRLRARLVKGETLARLARGFDLGEYLRLGSGELKSGGFRRESILADALEALIG
AIYLDADMQTARERILDWLTDEFDGLTLVDTNKDPKTRLQEFLQSRACELPRYEVVDIQG
EPHCRTFFVECEVVLLNNKSRGQGVSRRIAEQVAAASALIALGVENGND
NT seq 690 nt   +upstreamnt  +downstreamnt
atgagtgcttcccttacccgtctggagcgaaagctcggatacaccttcaagaaccaggag
cagatgctgctggccctgacccatcgcagctatgccgggcgcaacaacgagcgcctggag
ttcctcggcgacgccattctcaacttcgtggtgggcgaggcgctgttcgagcgcttcccc
caggcccgcgaaggccagctgtcgcgcctgcgagcccgcctggtcaagggtgagaccctg
gcccgcctggcccgaggcttcgacctgggtgaatacctgcgcctagggtcgggtgagctc
aaaagtggcggtttccgccgtgagtcgatcctggccgatgccctggaagcgctgattggc
gcgatctacctggatgcggacatgcagaccgcccgtgagcgcattctcgactggctcacc
gacgagttcgatggcttgaccctggtcgataccaacaaggaccccaagacccgcctgcag
gaattcctgcagtcgcgtgcctgcgagctgccgcgttacgaagtggtggacatccagggc
gaaccgcactgccgcacgttcttcgtcgaatgcgaagtggtgctgctgaataacaagagc
cgcggccagggcgtgagtcggcgtatcgccgaacaggtcgccgccgcctctgcattgatc
gccctgggcgtggagaatggcaatgactga

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

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