KEGG T02897: PVLB

Pseudomonas sp. VLB120: PVLB_09900

Entry

PVLB_09900        CDS       T02897

Name

(GenBank) sigma-54 dependent transcriptional regulator

K11914

sigma-54 dependent transcriptional regulator

Organism

psv Pseudomonas sp. VLB120

Brite

KEGG Orthology (KO) [BR:psv00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:psv03000]
    PVLB_09900
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:psv02044]
    PVLB_09900
Transcription factors [BR:psv03000]
Prokaryotic type
  Helix-turn-helix
   Other families
    PVLB_09900
Secretion system [BR:psv02044]
Type VI secretion system
  Imp/Vas secretion system related proteins
   PVLB_09900

SSDB

Motif

Pfam:

Sigma54_activat Sigma54_activ_2 HTH_8 GAF_2 HTH_30 GAF_3 HTH_50 AAA_5 AAA_16 AAA_2

Other DBs

NCBI-ProteinID:

AGZ34776

UniProt:

A0AAN0V9R3

Position

2172981..2174510

AA seq 509 aa
MFTHVPQPLAYAETLMGTFTELACAADEQGLMQALVQAVAGLSGCALVQVYLLDSTHTRL
GLEVACLDGQLQARDCASLPADYNGEQLMQFALCQNRMVSIAELSASMFDTSFLPAQATP
WQALLAVPLVTPQQRVVGVLLCVARARIELAGFADSLGRLGAFAMAQLHLLRRLRQPQPQ
LPASVAKPAEVGSYGLIGDSPAMRQTCQMISKVLHSPYTVLVLGETGTGKELVARAIHDY
GPRRSGPFVVQNCAAFPEHLLESELFGYRKGAFTGADRDRPGLFDAADGGTLLLDEIGDM
PLALQAKLLRVLQEGEIRPLGANSTHKIDVRIVAATHRDLAQMVRDGQFREDLYYRLAQF
PIDLPPLRQRDGDVSALARHFSDKACAFLQRSPVIWSNAALNHLEGYGFPGNVRELKGLV
ERAVVLCEGRELAAEHFALNGAASTAGDGELNLRERLEQVERNLLLDCLRKHDGNQTMAA
RELGLPRRTLLYRLGRLNIQIGDGAGRLA

NT seq 1530 nt +upstreamnt +downstreamnt
atgttcacgcatgtgccgcagcctctggcctatgccgagaccttgatggggaccttcacc
gagctggcctgcgccgctgacgagcagggcctgatgcaggcactggtccaggcggtggcc
gggctcagtggctgcgcgctggtgcaggtgtacttgctcgactcgacccacacgcggctg
gggcttgaggtcgcctgcctcgatgggcagttgcaggcgcgggactgtgccagcctgccg
gccgactacaatggcgagcagttgatgcagttcgccttgtgtcagaaccgcatggtgagc
atcgccgagctgtccgccagcatgttcgacaccagtttcctgccggctcaggcaacacca
tggcaggcgctgctggcggtgcccctggtgaccccgcagcaacgggtggttggcgtgttg
ttgtgcgtagcccgggcgcgcatcgagctggccggctttgccgactcgctgggacgcctc
ggtgctttcgccatggctcagttgcatctgctgcggcgtttgcgtcaaccccagccgcag
ctgccggccagtgtcgccaagccggccgaggtcggtagttacggcctgatcggtgacagc
ccggccatgcgtcagacctgccagatgatcagcaaggtgctgcacagcccttacaccgtg
ctggtgctcggtgagacgggcaccggcaaggaattggtggcccgggccatccacgactac
ggccctcgccgttcggggccattcgtggtgcagaactgcgcggcatttcccgagcacctg
ctggaaagcgagctgttcggttaccgcaaaggcgccttcaccggggccgaccgcgaccgc
ccgggactgttcgacgccgcggacggcggcaccctgttgctcgacgagattggtgacatg
ccgctggcgttgcaggccaagttgctgcgggtgctgcaggagggtgagatccgcccgttg
ggggctaacagcacgcacaagatcgacgtgcgcatcgtcgctgccacgcaccgtgacctg
gcgcagatggtgcgtgacggtcagttccgtgaagacctctattaccgcctggcccagttc
ccgatcgacttgccgccactgcgccagcgtgacggcgatgtgagtgccctggcacggcat
ttttccgataaggcctgtgcgttcctgcagcgcagcccagtgatctggtccaacgccgcc
ctgaaccacctcgaaggctatggcttccctggcaacgttcgcgagctcaaggggctggtg
gagcgcgcggtggtgctctgcgagggccgtgagctggcggcggagcactttgcgctgaac
ggcgccgcatccacagcgggcgatggcgagctgaacctgcgcgaacgcctcgagcaggtc
gagcgcaatctgctgctcgactgcctgcgcaagcacgatggcaaccagaccatggccgct
cgcgagttgggcttgccgcggcgcaccctgctgtaccgactcggtcgcctgaatatccag
atcggcgatggcgcaggccggctggcatga

All links

Gene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (13)   

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