KEGG   Pseudomonas sp. VLB120: PVLB_23475
Entry
PVLB_23475        CDS       T02897                                 
Name
(GenBank) DNA polymerase III subunit epsilon
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
psv  Pseudomonas sp. VLB120
Pathway
psv03030  DNA replication
psv03430  Mismatch repair
psv03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:psv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PVLB_23475
   03430 Mismatch repair
    PVLB_23475
   03440 Homologous recombination
    PVLB_23475
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:psv03032]
    PVLB_23475
   03400 DNA repair and recombination proteins [BR:psv03400]
    PVLB_23475
Enzymes [BR:psv01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     PVLB_23475
DNA replication proteins [BR:psv03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     PVLB_23475
DNA repair and recombination proteins [BR:psv03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     PVLB_23475
SSDB
Motif
Pfam: RNase_T Rv2179c-like RNase_H_2
Other DBs
NCBI-ProteinID: AGZ37474
UniProt: A0AA86AID9
Position
5169527..5170237
AA seq 236 aa
MSLFTWLRPNAPLLEASLRQRLSQLPKPAPLGVCTLREQRWVVLDLETSGLNTNRDQVLS
IGAVAIEDGAIDFAQQFERTLRRPEHKTNASVLIHGLGPSALAAGCDPAEALLDLLEFIG
DSPVLAFHAPFDQRMLARSLKESLGYRLQHPFIDIAELAPLLNPDTVLREASLDDWLACF
GLQVDERHHASADAQATAELALILFSQARRQKLDSPLQLEQRLRVMRRRKAHHYGL
NT seq 711 nt   +upstreamnt  +downstreamnt
atgagcctgttcacctggttgcgccccaacgcgcccctgctggaggcctcgctgcgccag
cgcctgtcgcagttgcccaagcctgcgccactgggcgtctgtaccctgcgtgagcagcgc
tgggtggtgctggacctggaaaccagcggcctgaacaccaaccgcgatcaggtgttgtcg
atcggcgcggtggcgatcgaggatggcgccatcgactttgcccaacagttcgagcgcacc
ttgcgccgcccggagcacaagaccaacgccagcgtgctgatccacggcctcggccctagc
gccctggctgccggatgcgacccggccgaagcattgctcgaccttctcgagttcattggc
gacagcccggtgctggctttccatgcgcctttcgatcaacgcatgttggcccgctcgctg
aaggaaagtcttggctatcgcctgcagcatcccttcatcgacattgccgaactggccccc
ctgctcaaccccgacaccgtgctgcgcgaagccagcctggacgactggttggcgtgcttc
ggcctgcaagtggacgaacgtcatcatgccagtgccgatgcccaggcgacggccgagctg
gccctgatcctgttcagccaggcccgccgccagaaattggatagcccgttgcaattggag
cagcgcttgcgcgtgatgcgtcggcgcaaggctcatcattacggtctttag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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