KEGG   Pseudomonas cremoricolorata: LK03_11005
Entry
LK03_11005        CDS       T03354                                 
Name
(GenBank) DNA polymerase III subunit alpha
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
psw  Pseudomonas cremoricolorata
Pathway
psw03030  DNA replication
psw03430  Mismatch repair
psw03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:psw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LK03_11005
   03430 Mismatch repair
    LK03_11005
   03440 Homologous recombination
    LK03_11005
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:psw03032]
    LK03_11005
   03400 DNA repair and recombination proteins [BR:psw03400]
    LK03_11005
Enzymes [BR:psw01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     LK03_11005
DNA replication proteins [BR:psw03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     LK03_11005
DNA repair and recombination proteins [BR:psw03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     LK03_11005
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon DNA_pol_IIIA_C tRNA_anti_2 HROB HHH_3
Other DBs
NCBI-ProteinID: AIR89788
UniProt: A0A089YDE7
Position
2498795..2502319
AA seq 1174 aa
MPVSFVHLRVHSEFSLVDGLVRVKPLAKALGEMNMPAVAITDQSNMCSLVKFYKSAMGAG
IKPICGADLWLAGTTADAPLSRICLLAMNPEGYRNLTELISRGWVEGQRNGLVIIQRDWI
APASAGLIGLSAAREGDIGMALLAGRQAEAEALLRDWMQMFPERFYVEVQRTGRPNEEEY
LHAAVALADQLGAPLVATNDVRFLKQSDFDAHETRVCIGEGWTLDDPRRPRHYSDEQYLK
SAEQMAELFSDLPDAIANTVEIAKRCNIQVQLGKAFLPDFPTPNGMGIDDYLRHVSHEGL
EERLAVLWPKATTPNYDEKRQVYLDRLKFELDIIIQMGFPGYFLIVMDFIKWAKNNGVPV
GPGRGSGAGSLVAYVLKITDLDPLAYDLLFERFLNPERVSMPDFDVDFCMDGRDRVIEYV
ADAYGRNAVSQIITFGTMAAKAVVRDVARVQGKSYGLADRLSKMIPFEVGMTLEKAFEQE
EILRDFLKSDEEAKEIWDMALKLEGVTRGTGKHAGGVVIAPTKLTDFSPVACDEEGGGLV
TQFDKDDVEAAGLVKFDFLGLRTLTIIKWAMETINREQAKMDLPDLNIDFIPLDDRKTYE
LLQKAETTAVFQLESRGMKELIKKLKPDCLEDLIALVALFRPGPLQSGMVDDFINRKHGR
AELAYPHPDYQYDGLQPVLAPTYGIILYQEQVMQIAQVMAGYTLGEADMLRRAMGKKKPE
EMAKQRGGFIEGCSRNNIEADLAGNIFDLVEKFAGYGFNKSHSAAYGLVSYQTAWLKTHH
PAPFMAAVLSADMHNTDKVVVLIEEVRSMKLRLDAPDVNSSEFKFTVNDDGRIVYGLGAI
KGVGEGPVEAIVEARAEGGPFKDLFDFCERVDLKRINKRTLDALIRSGALDRLGPHFHDE
IKAYHASIDINRAVLVSALEEAIKSAEQTARTAQSGHVDLFGGVFVEQDADVYANHRKAR
ELTLKERLRGEKDTLGLYLTGHPIDEYESEIRRFARQRIIDLKPSREVQTVAGMIIALRV
MKNKKGDKMGFVTLDDRSGRIEASLFADAFMAAQALLQTDAMVVIEGEVSHDDFSGGLRL
RVKQVMTMEDARTRLAESLRLKITQDALKGDRLSWLGELITRHRGGCPITLEYTGSDARA
MLQFGEQWCIDPADGLIQTLRDQFGRENVFLQYR
NT seq 3525 nt   +upstreamnt  +downstreamnt
atgccggtctctttcgttcacctgcgcgttcactccgaattctccctggtcgatggtctg
gtgcgggtcaagccgctggccaaggcgctgggcgagatgaacatgccggcggtagcgatt
accgatcagagcaacatgtgttcgctggtcaagttctataaatcggccatgggcgctgga
atcaagccgatctgtggcgccgacctgtggctggccggcaccacggccgatgcgccgctg
tcgcgcatctgcctgctggccatgaatcccgaaggttatcgcaacctcaccgagctgatt
tcccgtggttgggtcgaggggcagcgcaatggcctggtgatcatccaacgcgattggatc
gcgccggccagcgccggcctgataggcctgtcggccgcgcgtgagggcgatatcggcatg
gccctgctggccgggcgccaggccgaggccgaggcactgctgcgcgactggatgcagatg
ttccccgagcgcttctatgtggaggtgcagcgcaccggtcgtccgaacgaggaagagtac
ctgcacgccgcggtcgctttggccgatcagctgggcgcgccgctggtggcgaccaacgat
gtgcgctttctcaagcagtcggacttcgatgcccatgaaacccgcgtgtgtatcggtgag
ggctggaccctcgacgatccgcgccggcctcgtcactacagcgacgagcagtacctcaaa
agcgccgaacagatggccgagctgttcagcgatctgcccgacgccattgccaataccgtc
gagatcgccaagcgctgcaacatccaggtgcagttgggcaaggcgttcctgccagatttc
ccgacccccaatggcatgggcatcgacgattacctgcgccatgtgtcccacgaaggcctc
gaagagcgcttggcggtgctttggccgaaggccaccacacccaactatgacgagaaacgc
caggtctacctcgaccggctgaagttcgaactggacatcatcatccagatgggctttccc
ggttacttcctgatcgtcatggacttcatcaagtgggcgaagaacaacggcgtgccggtt
ggtcccggtcgaggctcgggtgccggctcgctggtggcctacgtgctgaagatcaccgac
ctcgacccgctggcctacgacctgctgttcgagcgcttcctcaaccccgagcgggtatcg
atgcccgacttcgacgtcgacttctgcatggatggtcgcgaccgggtcatcgagtacgtc
gccgacgcctacgggcgcaacgccgtcagccagatcatcaccttcggcaccatggctgcc
aaggcggtggtgcgtgacgtggcaagggttcagggcaagtcctacggcctggccgaccgc
ctgtcgaagatgattcccttcgaagtgggcatgaccctggaaaaagccttcgagcaagag
gaaatcctgcgcgacttcctcaagagcgacgaagaagccaaggaaatctgggacatggcc
ctcaagctcgagggcgttacccgcggtaccggcaagcatgccggtggtgtggtcatcgcg
ccgaccaaactcaccgacttctcgccggtggcctgtgatgaagaaggcggtggcctggtc
actcagttcgacaaggacgacgtcgaggctgcaggcctggtcaagttcgacttcctcggc
ctgcgtaccctgaccatcatcaagtgggcgatggaaaccatcaaccgcgagcaggccaag
atggacctgcccgacctgaacatcgacttcatcccgctggacgaccgcaagacctacgag
ctgttgcagaaggccgagaccactgcggtgttccagctcgaatcgcgtggcatgaaagag
ctgatcaagaagctcaagcccgactgcctcgaagacctcatcgcccttgtagcgctgttc
cgtcctggcccgttgcagtcgggcatggtcgatgacttcatcaaccgtaagcacggccgt
gccgagctggcctacccgcatcctgattaccagtacgacggcctgcagccggtgctggca
ccgacctacggcatcatcctgtaccaggaacaggtgatgcagatcgcccaagtcatggcc
ggctacaccctgggtgaagccgacatgctgcgccgcgccatgggcaagaagaagcccgag
gaaatggccaagcagcgcggcggtttcatcgaagggtgcagcaggaacaatatcgaagcg
gatcttgcaggcaacatcttcgacctggtagagaaattcgcaggttacggcttcaacaag
tcgcactctgccgcctacggactggtgtcgtaccagactgcctggctcaagactcaccac
ccggcaccgttcatggccgcggtactgtcggcggacatgcacaacaccgacaaggtcgtg
gtactgatcgaagaggtgcgcagcatgaagctgcgcctcgacgcgccggatgtgaacagc
tcggagttcaagttcaccgtcaacgacgatggccgtatcgtctatggcctgggcgccatc
aaaggggtgggcgaggggccggtggaggccatcgtcgaagctcgcgcagaaggtggcccg
ttcaaggacctgttcgatttctgcgagcgggtcgacctcaagcgcatcaacaaacgcacc
ctcgacgcgctgattcgaagcggcgcactggaccgtctgggtccgcactttcacgacgag
atcaaggcttaccacgccagcatcgacatcaaccgcgcagtgctggtgtcggcgctggaa
gaggcgatcaagtcggccgagcagaccgcgcgcaccgcgcagagcggccatgtcgacctg
ttcggcggggtgttcgtcgagcaggatgccgacgtctacgccaatcatcgcaaagcccgc
gagctgaccctcaaggaacgcctgcgcggtgagaaagacacgctgggcctgtacctgacc
ggtcacccgatcgatgagtacgagagcgaaattcgccgcttcgcgcgccagcgcatcatc
gacctcaagccctcgcgtgaggtgcagaccgtagccgggatgatcattgccctgcgcgtg
atgaagaacaagaaaggcgacaagatgggcttcgtcaccctcgacgaccgttccgggcgt
atcgaggcttcgttgttcgccgacgccttcatggccgcgcaggctctgctgcagaccgac
gccatggtggtgatcgaaggcgaggtcagccacgatgatttctctggcggcctgcgcctg
cgggtcaagcaggtgatgaccatggaagatgcccgtacccggcttgccgaaagtctgcgc
ctgaagattacccaggacgcgctcaagggcgaccggctgagctggctgggcgagctgatc
acccgtcatcgcggcggttgcccgatcaccctggagtacaccggcagcgacgccagggcc
atgttgcagttcggcgagcagtggtgcatcgacccagcagacggactgattcagaccctg
cgtgaccagttcggacgtgagaacgtcttcctgcaatatcgttga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (22)   

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