KEGG   Pseudomonas cremoricolorata: LK03_12655
Entry
LK03_12655        CDS       T03354                                 
Symbol
fliA
Name
(GenBank) flagellar biosynthesis sigma factor
  KO
K02405  RNA polymerase sigma factor FliA
Organism
psw  Pseudomonas cremoricolorata
Pathway
psw02020  Two-component system
psw02025  Biofilm formation - Pseudomonas aeruginosa
psw02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:psw00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    LK03_12655 (fliA)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    LK03_12655 (fliA)
  09142 Cell motility
   02040 Flagellar assembly
    LK03_12655 (fliA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:psw03021]
    LK03_12655 (fliA)
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:psw02035]
    LK03_12655 (fliA)
Transcription machinery [BR:psw03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     LK03_12655 (fliA)
Bacterial motility proteins [BR:psw02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    LK03_12655 (fliA)
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r3 Sigma70_r4_2 HTH_23 UPF0122 HTH_30 MarR_2 GerE Ketoacyl-synt_2 Rv2175c_wHTH Phage_terminase
Other DBs
NCBI-ProteinID: AIR90091
UniProt: A0A089WNC1
Position
2831331..2832071
AA seq 246 aa
MSASGFKMYSRASKDAQYELIERYAPLVKRIAYHLLARLPANVQVEDLIQAGMIGLLEVA
NKYDASKGASFETYAGIRIRGAMLDEVRKGDWAPRSVHRNTRMVSDAMRTVEARTGRDAK
DHEVAAELKMGLDDYYGILNDTLGSRLFSFDDLLQDGEHEGLHEDGASGQLEPGRDLEEE
RFQSALTEAIANLPERERLVLALYYDEELNLKEIGEVLGVSESRVSQLHSQCAARLRSRL
GEWRAR
NT seq 741 nt   +upstreamnt  +downstreamnt
atgagcgcgagcgggttcaagatgtacagccgagcgtccaaggatgcgcagtacgaactg
atcgagcgctacgcgccgttggtcaagcgtatcgcctatcacctgctggcgcgcctgccg
gccaacgtgcaggtcgaagacctgatccaggccggcatgatcggcctgctggaagtggct
aacaagtatgacgccagcaagggtgccagcttcgagacctacgctggcattcgcatccgc
ggcgccatgctcgatgaggtgcgcaagggcgactgggcaccgcgttcggtacaccgcaat
acccgtatggtcagcgacgccatgcgcacagtggaagccagaactggacgtgacgctaaa
gatcacgaggttgctgccgaactcaagatggggctggacgattattacggcattctcaac
gataccttgggcagtcgtctgttcagtttcgacgacctgctgcaggacggtgagcacgag
gggctgcacgaggatggcgccagcggccaactggagccgggccgcgatctggaggaggaa
cgcttccagagcgccctgaccgaggccatcgccaacctgccggagcgtgagcgcctggtg
ctggcgctgtactacgacgaagagctgaacctcaaggaaatcggcgaggtgctgggggtc
agcgagtcgcgcgtcagccagttgcacagccagtgcgccgcgcgcctgcgcagtcgcctt
ggggaatggcgcgcgcggtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (12)   
   Pfam (12)   
All databases (23)   

Download RDF
DBGET integrated database retrieval system