KEGG   Providencia stuartii ATCC 33672: DR96_318
Entry
DR96_318          CDS       T03282                                 
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V, alpha subunit
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
psx  Providencia stuartii ATCC 33672
Pathway
psx03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:psx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    DR96_318 (recD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:psx03400]
    DR96_318 (recD)
Enzymes [BR:psx01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     DR96_318 (recD)
DNA repair and recombination proteins [BR:psx03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     DR96_318 (recD)
SSDB
Motif
Pfam: AAA_19 AAA_30 RecD_N UvrD_C_2 Helicase_RecD Viral_helicase1 AAA_11 SH3_13 AAA_22 UvrD-helicase SLFN-g3_helicase DEAD AAA_16 nSTAND3 PhoH AAA_28 AAA UvrD_C NTPase_1 NACHT MukB CbiA
Other DBs
NCBI-ProteinID: AIN65909
Position
complement(352425..354281)
AA seq 618 aa
MKALFNKALEARLFTPLDIQFAYNITQEQNPTLLLLTALLSAETMAGHVCLSLSDFSQEK
LFAGRHPELADEFWHAIGTPDPETIYHLVKNAPFVCLAGESELSPLVLSGEFLYFQRLWQ
YEQSVSDYFSHTGLPQYNALRIKGILDALFPQSDEIDWQKIAAAVAVTSRVSVISGGPGT
GKTTTVARILAALVKLAVENKQRIQIELAAPTGKAAARLTESLGAALDGLSLTDEERHML
PNQAKTLHRLLGAQPESQQFRYHRDNLLTLDILIVDEASMVDLPMMGKLIEALPVNAKLI
FLGDKDQLASVEAGAVLGDICQFADQGYSPQRAQELAQLTGYALDHFTSNTGPLIRDSLC
LLRKSYRFSASSGIGQLAFAVNDGDTKRAEKLLNSTLNDVHTYLQESEDDYAQMLIAASN
FYQDYLLSVKARQDPAEILFKFNQFRLLTALRDGPYGVTGINEKLEKLLHRQGLIHRPLN
QINKHYAGRPIMISRNDSPLGLFNGDIGIILPDEEGALRAYFQYPDGSIKGIQPNRLPLH
ETAYAMTVHKSQGSEFAHTALVLPKVYSPVVTRELVYTAITRAKKELSLYCTIKILRRAI
ETPTKRRSGLAIQLMNVK
NT seq 1857 nt   +upstreamnt  +downstreamnt
atgaaagcgctgtttaataaagcgctcgaagcgcgattattcactccccttgatatccag
tttgcttataacattacacaagagcaaaacccaacattattactgcttaccgcattattg
agtgctgagacgatggcagggcatgtctgcttgtcattatctgatttcagtcaggaaaaa
ctgtttgcagggcgccatcctgaacttgcagacgaattttggcacgcaataggtacacct
gatccagaaaccatttatcacctagttaaaaatgccccttttgtctgcctagcgggggaa
agtgaattatcccccttggtgttatcgggggagtttttatattttcagcggctatggcaa
tatgagcaaagtgtttcagactacttttcacacaccggactacctcaatataatgctctg
cgcattaaaggaatattagacgctcttttcccgcaaagtgatgaaattgactggcaaaaa
atagctgccgcagtggctgtcactagccgagtttccgtgatttcaggggggcctggcacg
gggaaaacaaccacagttgctcgaattttagcggcattggttaaattggctgtagagaat
aaacaacgtattcaaattgaattagcagcgccgacaggtaaagctgcggcacgtttaaca
gagtcgttgggggcagcactcgatggcttgtcattgaccgatgaagagcgacatatgttg
cctaatcaggcaaaaacactgcataggctattaggggcacaacctgaaagccagcaattc
cgctatcaccgtgataatttattaacactggatattttgattgttgacgaggcttccatg
gtggatttacccatgatgggtaaattaatcgaagccttgccagtaaatgccaaattgatc
tttttaggggataaagatcaattagcatccgtcgaagcgggggctgtacttggagatatt
tgccaatttgcggatcaaggatatagccctcaacgtgcccaagaattggctcaactgaca
ggatacgcactcgatcactttacatcaaatacaggccctttgatcagagatagcctctgc
ctactgcgtaaaagttaccgtttttcggcttcttcgggtatcgggcagcttgcttttgcg
gttaatgatggagataccaagcgtgctgaaaagttattaaacagcacattaaatgacgtg
catacttatttacaagaaagtgaggatgattatgcacagatgttgatagcggcatctaat
ttctatcaagattatcttctatcagtaaaagctagacaggatccggctgagattttattt
aaatttaatcaatttcgtttgttgacagctttgagagatggcccctatggtgtaacaggg
ataaacgaaaaattagaaaaactgcttcatcggcaggggcttattcatcggccattaaac
caaataaataaacattatgcaggtaggccaattatgatcagccgaaatgatagtccatta
gggctatttaatggcgatatagggataatcctgcctgatgaagaaggggcacttagagct
tattttcagtatcccgatggctcaattaaggggatccaacctaatcggttgcctttacat
gaaacagcatatgcaatgactgtacataaatcacaaggttcagagtttgctcataccgcc
ttagtactaccgaaggtatattcaccagtcgtcactcgagagcttgtgtatactgcaata
actcgcgccaaaaaagaactttctttgtattgcacgattaagattttacgccgtgccatt
gagacaccgacgaaacgacgtagtggcttagcaatacagctcatgaatgtaaaataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (22)   
   Pfam (22)   
All databases (31)   

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