KEGG   Psychromonas sp. CNPT3: PCNPT3_10170
Entry
PCNPT3_10170      CDS       T02515                                 
Name
(GenBank) DNA polymerase III subunit alpha
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
psy  Psychromonas sp. CNPT3
Pathway
psy03030  DNA replication
psy03430  Mismatch repair
psy03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:psy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PCNPT3_10170
   03430 Mismatch repair
    PCNPT3_10170
   03440 Homologous recombination
    PCNPT3_10170
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:psy03032]
    PCNPT3_10170
   03400 DNA repair and recombination proteins [BR:psy03400]
    PCNPT3_10170
Enzymes [BR:psy01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     PCNPT3_10170
DNA replication proteins [BR:psy03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     PCNPT3_10170
DNA repair and recombination proteins [BR:psy03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     PCNPT3_10170
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 DNA_pol_IIIA_C tRNA_anti-codon
Other DBs
NCBI-ProteinID: AGH81972
UniProt: M4U9Y2
Position
complement(2400054..2403566)
AA seq 1170 aa
MSESSVSHDPKFIHLRVHSDFSMVDGLTKVKALIANTAAMNMPAIALTDQTNFCGLVKFY
TAAHSAGVKPLVGVDFWVQSEILEKEQFRITALAMDNEGYKNITELISKAYFRGHVGGRA
ILDQDWLKEYNHGIILLSGAKEGDLGKMLLKGHFELASEITQFYQTYFPQRYYLELIRTG
RVKEETYIHHALEWAEKHQLPVVATNQVVFSNKTLFDAHVIRVCINQGYTLGDERRPHDY
SEEQYLRSPEEMCELFSDIPEALQNSVEIAKRCNVTLRLGECFLPDFPTQGKPINDYFIE
VSRQGLNARLEFLFDKNSADFAQIRAPYDERLRIELEVINSMGFPGYFLIVMEFIQWSKD
NGIPVGPGRGSGAGSLVAYALNITDLDPLKLDLLFERFLNPERVSMPDFDIDFCMERRDE
VIDHVAQLYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDSISKLVPPTPGMTLSK
AFEEEPRLQERYDGSEEVRDLIDMCRTLEGTIRNAGKHAGGVVISPTTITDFAPLYCDDE
GKNPVTQFDKNDVETAGLVKFDFLGLRTLTIIQWALDMANAHKSDRGEEAIEIERISLTE
PKCFELLKRYETTSVFQLESRGMKDLIRRLQPDSFEDMIALVALFRPGPLGSGMVDNFIE
RKHGREAVSYPDEKWQHESLKEILDPTYGIILYQEQVMQIAQILSGYTLGGADMLRRAMG
KKKPEEMAKQRSTFEQGAINNGIDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLW
MKTFYPAYFMAAVLSADMDNTDKVVILVSECQRMGLNLCPPDVNEGQFKFNVDKNLRIIY
GIGAVKGVGEGPINAIIEARTIGGDFRDLFDFCNRVDLKHCGKRIIEKLILAGALDNLGP
HRAALMENLPLALASATQHKRAESFGQCDLFGVLTTDSADIENRFSKVEKWPEKQWLAGE
KETLGLYLTGHPINQYEAHIRAFHCKPIVDLSSDRRGQNSRIAGLIIGLRVMVTKAGKRM
GILTVDDRTARIDITIFADLLDQYEALLVMDKVIVLQGQVSEDFFNGGLKMNAREVMSID
QARERFASKLRLKINKEKIADDFQVHFNEALQVAKGGLCPVYIQYTQEKACAELALGLSW
SVTPSDDLLFALQKLLGDDNVSLQFEQITS
NT seq 3513 nt   +upstreamnt  +downstreamnt
atgtccgaatccagtgtaagtcatgatcctaaatttattcacttaagagtacacagtgac
ttttcgatggttgatggtttaaccaaagtaaaagcgttgattgcaaatacagccgcaatg
aacatgcctgccattgccttaaccgaccaaactaatttttgtggcttagtgaagttttat
actgcagcacatagtgcgggtgtaaagccattggtgggtgtcgatttttgggtgcaaagt
gaaattttagaaaaagagcagtttcgcattacggctcttgcaatggacaatgagggttat
aaaaatataacggagcttatatccaaagcttattttcgaggccatgttggtgggcgcgca
attcttgatcaagattggctcaaagaatataaccacggtattattttactttctggagcc
aaagagggcgacttgggtaaaatgttattaaagggccattttgaattggcgagtgagata
acgcaattttatcaaacttattttccacaacgttattatcttgaattgatacgcacaggg
cgtgttaaagaagagacgtatatacaccatgctctcgagtgggctgaaaaacatcaattg
ccggtggtggctaccaaccaagtcgttttttctaacaaaacattatttgatgcgcatgtt
atccgcgtgtgtatcaatcagggctatacattaggcgatgaacgtcgcccgcatgattac
agtgaagagcagtatttacgcagcccagaagagatgtgcgagctcttttcagatatccct
gaagcattgcaaaatagcgttgaaatagccaagcgttgtaacgtgacactacggttaggt
gagtgttttttacccgacttccctacgcaaggtaaacccattaatgattattttattgag
gtttctcgccaaggtttaaacgcccgtttagagtttttatttgataaaaacagtgctgat
tttgcgcagatacgcgcgccttatgatgagcgcttgagaattgaactcgaggtcattaac
tcgatgggatttccgggttatttcttgattgtaatggagtttattcagtggagtaaagac
aatggaataccggtcggtccaggacgtgggagtggtgcgggatcattggttgcatacgca
cttaatattaccgatttagatccattaaaactcgatttactgtttgagcgatttttgaat
ccagagcgtgtgtcgatgcccgattttgatatcgatttttgcatggaaagacgtgatgaa
gtgattgatcatgttgcgcaattatatggtcgtgatgcggtttcgcaaattattaccttt
gggactatggccgccaaagcggttattcgtgatgtgggccgagtactgggtcatccttat
ggttttgtcgatagtatttctaaactggttccgccgacgccaggcatgacgctgagcaaa
gcgtttgaggaagagcctcgcttgcaagagcgctacgatggcagtgaagaagtgcgcgac
ttgattgatatgtgtcgaacattggaaggcactattcgtaatgcgggtaaacatgccggt
ggcgtggttatttcacccacgaccattaccgattttgcacctttgtactgtgatgatgaa
ggtaagaatcccgttacgcaatttgataagaatgatgttgaaaccgcgggtctggttaaa
ttcgattttctaggtttgcgtaccctcactatcattcagtgggcattggatatggccaat
gcgcataaaagcgatcgcggtgaagaggcgattgaaatagagcgcataagcttaacggag
cctaaatgttttgagcttttaaaacgctatgaaaccacttcggtctttcagcttgaatca
cgcggtatgaaagatcttattaggcgtctacaaccggattcctttgaagatatgatagcc
ttagtggcgttatttaggcccggtccattaggctctggcatggtagataactttattgag
cgtaaacatggtcgtgaagcggtctcttaccccgatgaaaaatggcaacatgaatcactc
aaagaaatactagatcctacttacggtattattttgtatcaagagcaagtgatgcaaatt
gcgcagatattatcgggttataccttgggtggcgctgatatgttacgccgcgcgatgggt
aaaaagaaacctgaagagatggcgaaacaacggagcacctttgagcaaggtgcgattaat
aatggcatagatggcgaactcgccatgaaaatatttgatttagtagaaaagtttgcgggt
tatggttttaataaatcacactcggcggcctatgcgttagtgtcgtatcaaacgctgtgg
atgaaaacattttatcctgcctactttatggcagccgtactttctgcggatatggataat
accgacaaagtggttattttggtgtcagaatgtcagcgcatggggcttaatctgtgtcca
cctgatgtgaatgaaggccagtttaaatttaatgtcgataaaaacctgcgcattatttat
ggtattggggcggtgaaaggtgtgggtgaaggcccgattaatgccattatagaggcgcgc
acgattggtggggatttccgcgatctttttgatttttgtaatcgagtggatttaaagcat
tgtggtaaacgtattattgaaaaattaatattagccggtgcattagataatttaggccct
cacagggcagctttaatggaaaatttacccttagccttagcgtctgcaacgcagcataaa
agggctgaatcatttggtcagtgcgatttgtttggtgtgttaacgacggacagtgctgat
attgaaaatagattttctaaagttgaaaaatggcctgagaagcagtggcttgcgggtgaa
aaagaaaccttaggattatatttaaccgggcatccgatcaatcaatatgaagcgcatata
cgggcgtttcattgtaagcctattgttgatttaagcagtgaccgccgtggacaaaatagc
cgaatagcggggcttattattggcctgcgtgtgatggtgaccaaagcgggtaagcgtatg
gggattttaaccgtagacgatagaaccgcacgcatcgatatcaccatctttgctgatctt
cttgaccaatatgaagcgttattagtgatggataaagtcattgtattacaaggccaagtg
agtgaagacttctttaatggtggtcttaaaatgaacgcgagagaagtgatgagtattgat
caggcgcgcgagcgttttgcctctaaattgcgtttaaaaataaataaagaaaagatagca
gatgattttcaggtgcattttaacgaggcattgcaagtcgctaaaggtggtttgtgcccc
gtttatatacaatatacgcaggaaaaggcatgtgcggagttagcgttaggtttatcgtgg
tcggtgacaccgagtgatgatttactttttgcgttgcaaaaattactgggcgacgacaac
gtcagtttgcaatttgaacaaataacaagttag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (19)   

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