KEGG   Psychrobacter sp. DAB_AL43B: DABAL43B_1065
Entry
DABAL43B_1065     CDS       T04748                                 
Name
(GenBank) Rhs element Vgr protein
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
psyc  Psychrobacter sp. DAB_AL43B
Pathway
psyc03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:psyc00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    DABAL43B_1065
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:psyc02044]
    DABAL43B_1065
Secretion system [BR:psyc02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   DABAL43B_1065
SSDB
Motif
Pfam: DUF2345 T6SS_Vgr Phage_base_V Sarcoglycan_1
Other DBs
NCBI-ProteinID: SLJ84263
UniProt: A0A1U6GL67
Position
I:1231697..1233505
AA seq 602 aa
MSFVSSTYHGLAQARTGSATTPSYDSSVSTDNLQQTMTTPVWSGISPHDDGTTPPLRALQ
LSSGSTHGWQFAPRLGQSVLLNHWYGDIDSPVISRALFDGIGMGDVDDKDITTRDSGLSN
KHNLQGGSSPRWHGGGLGHSQINDDDGHSGWLSGIAQYGLSSDSEVSLSFDDTPNQIGMQ
WTVNTGSKANAETPTITSSATFAPDEHVLELGILRHRYSNHQSSDSGQGINLASDHGLQI
SGESGVLLSTFRLRHSQTEHESAWVNDAGQRQLKLGIELSEIFKEVKQAHLQSTAALSNT
NQTIEAFKTSAQIIDETLNTEVLGAADVTLVSKDSILASASNTLWTAKTIVRQSGSTQSD
VVAGNYTLTANTIDSLSGVGGQADRSGLHISANREPLAIQAQGGELQLHSQQSMTIGSES
GQVNLSSPKRIKLQTSAGASITIDDSGIKLVCPGTIKIKAVKKSLVAGTKVNAPVVALPT
SGLFSRRFDFSQLLEADILTAGRQYKIINRSKGTEFYDVLPEDGRTPRIFGIEEDEIEIV
IIGHEDAGELLMIENEIDNSNHDHEDEECCAPEEDDDTTESQPDSYTNLDDNLEDDYYEF
GN
NT seq 1809 nt   +upstreamnt  +downstreamnt
ttgtcctttgtcagcagcacctatcatggtctcgcccaagcgcgtactggcagcgctact
acaccaagttatgactcaagtgtcagcactgacaatctacaacaaaccatgaccaccccc
gtttggtcaggcatcagtcctcacgatgacggtactaccccgccgctacgtgcactacaa
ctgtcatcgggtagcactcatggctggcagttcgccccgcggttgggacagtcagtactc
cttaaccattggtacggtgatattgacagtcccgtcattagccgcgcactgttcgacggt
atcggtatgggcgatgtcgatgacaaagacatcaccactcgtgatagcggactatcgaat
aaacacaacttacaaggcggatcttctcctagatggcatggtggtggcctcggtcattcg
caaatcaatgacgatgatggacacagtggctggctatcaggtattgcccagtatggattg
agttctgattctgaggtgagcctaagctttgatgatacgccaaaccagattggtatgcag
tggacggtgaatacgggcagcaaagccaatgctgagacgccaaccatcacttctagcgcc
acctttgcccctgatgagcatgtattagagcttggcatactgcgtcatcgttatagcaac
catcaatctagcgatagtggccaagggattaatctggcaagcgatcatggcttacaaatc
agtggcgagtcaggcgtgctgctctctactttcagattaagacacagccaaacggagcat
gagtcagcgtgggtcaatgacgccggacaacgccagttaaaactgggcattgaactgagt
gaaatcttcaaggaggtcaagcaggcacacttgcaatctacggcagcacttagtaatacc
aaccaaacgatagaggcctttaaaaccagcgcacaaattatagatgagacgctaaatacg
gaagtgttaggcgcagccgatgtgacgctggtcagcaaagacagtatccttgcttccgca
agtaatacgctatggacggcgaaaacaatagtcagacaatcaggcagcacccagtcggat
gtcgtggcaggcaattatacgctgacggcaaatacgattgattcgctctctggggttggt
ggtcaagccgatcggtcaggattacatatcagtgccaatagagagccactagcgatacaa
gcacagggtggtgagttgcaattacacagccagcagtcgatgacgattggtagtgagtcg
ggtcaggtgaacctgtccagtccgaagcgtattaagctgcaaacctcagcaggagcatcc
attacgattgatgacagcgggattaagctggtgtgcccggggacgattaagatcaaggcg
gtgaagaagagtttggtggcggggactaaggtgaatgcgccagtggttgctttgccaact
tcggggttgtttagtcgtcgttttgattttagccagctattagaggcagatatattaaca
gcaggtagacagtacaaaatcattaatcgttctaaaggaacagagttttacgatgtgtta
cctgaagatggtagaacgcctagaatatttggaattgaagaagatgagattgaaattgtt
attattggtcatgaggatgctggagagctcctgatgatagaaaatgagattgacaatagt
aatcatgaccatgaggacgaggaatgctgtgctcctgaagaggacgatgatacgactgaa
tctcaacctgattcatatactaacttagatgacaatctagaggatgactactatgaattt
ggtaattaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (19)   

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