KEGG   Psychrobacter sp. PAMC27889: E5677_13010
Entry
E5677_13010       CDS       T06076                                 
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
psyp  Psychrobacter sp. PAMC27889
Pathway
psyp03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:psyp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    E5677_13010 (pnp)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:psyp03019]
    E5677_13010 (pnp)
   03016 Transfer RNA biogenesis [BR:psyp03016]
    E5677_13010 (pnp)
Enzymes [BR:psyp01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     E5677_13010 (pnp)
Messenger RNA biogenesis [BR:psyp03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     E5677_13010 (pnp)
Transfer RNA biogenesis [BR:psyp03016]
 Prokaryotic type
  tRNA degradation factors
   E5677_13010 (pnp)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C PNPase S1 KH_1 KH_2 S1_2
Other DBs
NCBI-ProteinID: QCB31837
UniProt: A0A7Z9EXD3
Position
complement(3135461..3137563)
AA seq 700 aa
MTMFNTIKREFQYGNQQVVIETGRVARQANSILVHMGGVTVLVAAVVKSEAKEGQNFFPL
TVNYQEKMYAAGKIPGAYGKREGRASEFETLTSRLIDRPIRPLFPEGYVNEIQITATVVS
SDKTQSADIAALIGASAALAISDAPFNGPVAAARVGFINGEYVLNPTLEELKESDLDLVV
AGTKSAVLMVESEAAELSEDQMLGAVLYGHEQQQIVIDNIASMAEEVGTAKQQYSAPERD
KALETSMKEQFGEQVADAYTITDKQERYTKLDDIKQSVIDALAGDAESENYAETVSELKE
IYNDLKYRTVRDNILSGKPRIDGRDLETVRALDVQVGVLPYTHGSALFTRGETQALVTTT
LGNSRDVNMIDSLGGTIRDHFMLHYNFPHFSVGETGREGIPKRREIGHGRLARRGVEAML
PDSERFPYVIRVVSEITESNGSSSMASVCGASLALMDAGVPLKAPVAGIAMGLVKEGERF
AVLSDILGDEDHLGDMDFKVAGSKNGITALQMDIKIEGITPDIMEQALKQAHAGRIHILD
AMNKVLPESRTEINAHAPNYAVIEINPDKIRDVIGKGGAMIRQLTEETGAVIDIDDGGTI
RIFGENKAATKAAIGRIEALTAEVEVGKTYEGTVARIVDFGAFVNVLPNTDGLVHISQIA
EERVENVSDYLKEGQVVKVFVQDVDNRGRIKLTMKGIEQN
NT seq 2103 nt   +upstreamnt  +downstreamnt
atgacaatgtttaataccattaagcgtgaattccagtatggcaaccagcaggttgttatc
gaaactggtcgagttgcacgtcaggccaattctattttggtacacatgggcggtgttacg
gtactagtcgcagcggttgtaaaatcagaagccaaagaaggacaaaacttctttccactt
accgtaaactatcaagaaaaaatgtatgcggcaggtaaaatcccaggtgcttatggcaaa
cgtgaaggccgtgctagcgaatttgaaacgctaacctcacgcttgattgatcgtccgatt
cgtccactatttccagaaggttatgtaaacgaaatccagattacagctaccgttgtatca
tcagataaaactcagtctgcagatatcgctgcattgattggtgcttcagcggcgttggct
atctctgatgcgccattcaacggccctgttgctgctgcgcgtgttggtttcatcaatggt
gaatacgttcttaacccaacacttgaagagcttaaagaaagtgatcttgacttggttgtc
gctggtaccaaatctgcggtattgatggttgaatctgaagcggcagagctgtctgaagat
cagatgttaggcgctgtattgtacggtcatgagcagcagcaaatcgtcattgacaatatt
gcctcaatggcagaagaagtgggtacggctaagcagcagtattctgcgcctgagcgtgat
aaagccttagaaaccagcatgaaagagcagtttggcgagcaagtagctgacgcttatacc
atcacggataagcaagagcgctataccaaacttgacgacattaagcagtcagttattgat
gcgcttgctggtgatgctgaatcagaaaactatgctgagaccgtatctgagttaaaagaa
atctataacgaccttaaatatcgtacggttcgtgacaatatcttgtcaggtaagccacgt
atcgatggccgtgatcttgaaaccgttcgtgcgcttgatgtacaagttggtgtactccct
tatacgcatggttcagcactatttactcgcggtgagacgcaagcattggttacgaccacg
cttggtaacagccgtgacgttaacatgattgattcactaggtggtacgattcgtgatcat
ttcatgttgcattataacttcccacatttctctgttggtgagacaggtcgtgaaggtatt
ccaaaacgtcgtgaaatcggtcatggtcgtctagcgcgccgcggtgtagaagcgatgcta
ccagatagcgaacgcttcccatatgttattcgtgtggtgtcagagattactgaatcaaac
ggttcatcttctatggcttctgtttgtggcgcaagtttggcattgatggatgcgggtgta
ccattaaaagcccctgttgctggtatcgcaatgggtctggttaaagaaggcgaacgtttt
gctgtcttatcagatatcttaggtgatgaagatcatcttggcgatatggattttaaagtg
gcagggtctaaaaatggtatcactgcgctacagatggatatcaagattgaaggcatcacg
cctgatatcatggaacaggcgcttaaacaagcccatgctggtcgtattcatatcttggac
gccatgaacaaagtattgccagaaagccgtactgaaatcaatgctcatgcgcctaactat
gctgttatcgaaatcaacccagataagattcgtgacgtcatcggtaaaggcggcgcaatg
attcgtcagctaactgaagagaccggtgcggttatcgacatcgatgacggtggcacgatt
cgtatctttggtgaaaacaaagcagcaaccaaagcggctatcggtagaatcgaagcattg
acggctgaagttgaagttggcaaaacgtatgaaggtacggttgctcgtatcgtcgacttt
ggtgcttttgtgaatgttctaccaaatacagatggtttggttcatatctcacaaatcgca
gaagagcgcgtagagaatgtatcagactacctaaaagaaggtcaggttgttaaagtcttt
gtacaagacgttgataatcgtggtcgtatcaagttaacgatgaaaggtatcgagcaaaac
taa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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