KEGG   Pseudomonas syringae CC1557: N018_18855
Entry
N018_18855        CDS       T03014                                 
Name
(GenBank) tRNA pseudouridine synthase D
  KO
K06176  tRNA pseudouridine13 synthase [EC:5.4.99.27]
Organism
psyr  Pseudomonas syringae CC1557
Brite
KEGG Orthology (KO) [BR:psyr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:psyr03016]
    N018_18855
Enzymes [BR:psyr01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.27  tRNA pseudouridine13 synthase
     N018_18855
Transfer RNA biogenesis [BR:psyr03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    N018_18855
 Prokaryotic type
    N018_18855
SSDB
Motif
Pfam: TruD E3_binding
Other DBs
NCBI-ProteinID: AHG42156
UniProt: W0MZ91
Position
complement(4178043..4179101)
AA seq 352 aa
MIELELLGPRAYGDALGRAALKAVAEDFQVDEVLDIPLSGAGEHLWLWVEKRGLNTEEAA
RRLARAAGVQLRTVSYAGLKDRQALTRQWFSIQLPGKADPDFSAAQDETLQILKSGRHTR
KLQRGAHAANGFTLRLTQLSADKDALNQRLETIARQGIPNYFGSQRFGYQGGNLGEARDY
AARQALPEQRAVRSRLLSTARSYLFNRVLAARVADGSWQHAKVGDLLAFTDSRSFFPAGI
AECSDPRLAILDLHPTGPQWGEGPSPASGAIAELENSIAADESSLRDWLVRAGMDHERRI
LRLPIGRLTWHYPEPDILQLEFVLPPGCFATVLVRELVDLVPAGQTDSSCVF
NT seq 1059 nt   +upstreamnt  +downstreamnt
atgatcgaactcgaactgctgggcccaagggcctacggcgatgcgttgggtcgtgccgct
ctcaaggccgttgccgaagactttcaggtcgatgaagtgctggatattccgctgtctggc
gctggcgagcacctgtggttatgggtcgaaaaacgaggcctgaacaccgaggaagctgcc
cgcaggctggcacgtgctgcgggtgtgcaattgcgtaccgtcagctacgcaggactgaaa
gaccgtcaggctctgacccgccaatggttcagcattcagttgccaggcaaggccgatccc
gatttttcggcggcgcaggacgagacgctgcagattctcaagagcggccggcacacgcgc
aaattgcagcgtggggctcatgcggccaacgggtttacgctcaggctgacgcaattaagt
gctgacaaggacgcgttgaatcagcgcctggaaaccattgcccggcagggtatccccaac
tatttcggttcgcagcgcttcggttatcagggcggcaatctgggcgaggctcgcgattac
gcagcccgacaggcgttacccgagcagcgtgcggtgcgttcacggctgttgtccacggcg
cgcagttacctgttcaatcgggtacttgcggcgcgggttgccgacggcagctggcaacac
gccaaggtgggtgatttgctggcgttcaccgacagtcgcagtttttttccggccgggatt
gccgagtgcagcgaccctcgtttggcgatcctcgatctccatcctaccggcccgcagtgg
ggggaaggcccttcgccagcttccggtgctatcgcagagctggaaaattccatcgccgcc
gatgagtcttcactgcgcgactggctggtcagagcgggtatggatcacgaacgtcgcatc
ctgcggctgcccattgggcggctgacgtggcattatcccgagcctgacattctgcaactg
gaattcgtcctgccgcccggatgcttcgccactgttttggtgcgtgaactcgttgatctg
gtgccggccgggcagacggacagctcatgcgtattctga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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