KEGG   Psychrobacter sp. YP14: DLE54_11845
Entry
DLE54_11845       CDS       T05488                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
psyy  Psychrobacter sp. YP14
Brite
KEGG Orthology (KO) [BR:psyy00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:psyy02048]
    DLE54_11845
Enzymes [BR:psyy01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     DLE54_11845
Prokaryotic defense system [BR:psyy02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   DLE54_11845
SSDB
Motif
Pfam: EcoR124_C SWI2_SNF2 HSDR_N ResIII DEAD HSDR_N_2 Ndc10_N
Other DBs
NCBI-ProteinID: AWT50314
Position
plas3:complement(11996..15097)
AA seq 1033 aa
MTDQTKTIAESNNFIVLNKYTKCDQPDGGYQTEDDLERELLKDLQNQGYEFVPGLNSPET
MLANVRVQLQILNEVQFTDAEWKRFVMEYLDNPSDNITDKARKIHDDHIYDFTFDDGHLQ
NIALLDKKNIPRNKVQVIKQFAQKGTQANRYDVTILVNGLPLVQIELKKRGIAIREAFNQ
VHRYSKESFNSDNSLYKYLQLFVISNGTDTRYFANTTKRNKNSFDFTMNWARSDNTLIKD
LKDFTATFFQKNTLLNVLMHYTVFDVSNTSLVMRPYQIAATERILWKINSAYQAKKWSTL
ESGGYIWHTTGSGKTLTSFKAARLATSLPFIDKVFFVVDRKDLDYQTMKEYQRFSPDSVN
GSDSTAGLKRNLEKDDNKIVVTTIQKLNNLIKGEADLPIYNKQVVFIFDEAHRSQFGEAQ
KNLKKKFKKYYQFGFTGTPIFPENALGAETTASVFGHELHSYVITDAIRDEKVLKFKVDY
NDVRPQFQAIESEQDEKKLTAAENKQLLLHPDRIEEISKYVLKSFRQKTHRLKGSGKGFN
AMFAVSSVDAAKAYYEALNQLQKDSERPLKIATIFSYAANEEQDAIGDIADEGFEPTAMN
SSAKEFLSRAINDYNEMFKTNYGVDSKSFQNYYRDLAGRVIKQDVDLLIVVGMFLTGFDA
PTLNTLYVDKNLRYHGLMQAFSRTNRIYDATKTFGNIVTFRDLEQATIDAITLFGDRNTK
NVVLEKSYREYLEGFTDIATGKARRGYLEVIKELQQRFPNPDEIVKEADKKDFAKLFGEY
LRVENILQNYDEFASLKALQSIDITDTEAVETFKAEHYLTDEDLAAMQSIDVPAERTVQD
YRSTYNDIRDWLRREKAAKHQSESSLDWDEVVFEVDLLKSQEINLDYILELIFEHNKNTK
DKSALVEEVRRVIRASLGNRAKESLVVDFINKTNLDNIPDKSSIIEAFFNFAQIEQQREA
QDMIAAENLNEEAAKRYITASLKREYASENGTELNEVLPKLSPLNPQYLTKKQSVFQKMS
AFVEKFKGVGGRV
NT seq 3102 nt   +upstreamnt  +downstreamnt
atgactgaccaaacaaaaaccattgctgaatcgaataattttatagttttaaataagtat
accaagtgcgatcagcctgatgggggctatcaaactgaagacgatttagagcgtgagcta
ctcaaagacttacaaaaccagggatatgagtttgtccctggtttaaactcgcctgaaacg
atgcttgctaacgtacgtgtacagctgcagatcttaaatgaggtgcagtttacagatgct
gagtggaagcgctttgtgatggagtatcttgataacccgagcgataacatcacggacaaa
gctcgaaagattcatgatgaccatatctatgattttacctttgatgatggacacctgcag
aacattgccctgctggacaaaaaaaacatcccacgtaacaaagtacaggtcattaaacag
tttgctcaaaaaggcacacaggccaatcgctatgatgtgactattttggtcaatggcttg
ccgcttgtgcaaattgagcttaaaaaacgtggtatcgccattcgtgaagcatttaaccaa
gtacatcgttatagcaaagagagctttaactccgataactccttatataaatatctacag
ctgtttgtgatctcaaatggcactgatacccgctactttgccaataccaccaagcgcaat
aaaaatagctttgatttcaccatgaactgggcacgatcagacaataccctaatcaaagac
ttaaaagactttactgcgaccttctttcaaaaaaataccctattaaacgtgctgatgcat
tacaccgtctttgatgtgagtaatacgtcattggtgatgcgcccgtatcagattgccgct
actgagcgcattttatggaagataaacagtgcttatcaagccaagaagtggagcactctt
gagagtggcggctatatttggcataccacaggctcaggtaagactttaaccagttttaaa
gctgcccgcttagcaacgtcgctaccttttattgataaggtgttttttgtggtggatcgt
aaagatcttgattatcaaaccatgaaagagtaccagcgcttctcccctgatagcgttaat
ggctccgacagtaccgcaggactcaagcgcaaccttgaaaaagacgataataaaattgtt
gtcaccaccattcaaaagctaaataacctgatcaaaggtgaggctgatttacccatctat
aataaacaagtggtgtttatctttgatgaggcacaccggagccagtttggtgaagcacaa
aagaacttaaagaaaaaatttaaaaaatactaccagtttggttttacaggcactcctatc
tttccagagaacgctttaggtgcagagacgacggccagtgtgtttggccatgagctgcat
tcatacgtcatcactgatgccattcgtgatgagaaggtcttgaagtttaaggtggactac
aatgacgtgcgcccacagtttcaagccattgaaagcgagcaagatgagaagaaactcaca
gctgctgaaaacaagcagctgttattacaccctgatcgtattgaagagatctcaaagtac
gttttaaaaagctttaggcaaaaaacccatcgcttaaaaggaagtggtaaaggttttaat
gccatgtttgctgttagtagtgtggacgcagcaaaggcttactatgaagccttgaatcag
ctacaaaaggacagtgagaggcccttaaagattgccactatcttttcttatgctgccaat
gaagaacaagatgcaatcggtgacattgctgacgaaggctttgagcctaccgctatgaat
agcagtgccaaagagtttttaagccgtgctattaatgactataacgagatgtttaagacc
aattacggcgtagacagtaagtcttttcaaaactactaccgtgatcttgcaggacgcgtt
attaagcaggatgtggacttactgattgttgtcggtatgttcctcacaggttttgatgcg
ccgaccttaaacacgctctatgttgataaaaaccttcgctatcacggtctgatgcaagcg
ttctcacgtactaaccgcatttatgatgcgactaagacctttggcaatatcgtgacgttt
cgtgacttagagcaagcgaccattgatgccatcaccttgtttggtgatagaaacactaag
aacgtggtgttagaaaaaagctatagggagtatctagaaggctttactgatattgcgaca
ggcaaagcacgacgaggctatttggaggttattaaggagctacagcaacgcttccctaac
cctgatgagatcgtcaaagaggcagacaaaaaggactttgctaagttatttggcgagtac
ttacgcgtcgagaacattttacaaaactatgatgagttcgcgagcctaaaagcgcttcaa
agcatagatattactgatactgaagcagttgagacattcaaagctgagcactatttgacg
gatgaagatcttgctgccatgcaaagtatcgatgtacctgctgaacgcaccgtacaagac
tatcgatcaacgtataacgacatacgtgattggctgcgccgtgaaaaagcagccaagcat
caaagcgagtcctcgcttgactgggatgaagtggtttttgaggtggatcttcttaagtct
caagagattaaccttgattacatccttgagctgatttttgagcataataagaataccaag
gataagtccgccttggtcgaagaagtacgtcgtgtaattagagccagccttggtaatcgc
gctaaagaaagtctggtggtagatttcatcaataaaaccaacttggacaatattcctgat
aaatctagtattattgaggccttctttaattttgctcaaatagaacaacagcgtgaagct
caggatatgattgctgctgaaaaccttaatgaagaggcagctaagcgttatataaccgca
tctttaaagcgtgagtacgccagtgagaatggtacggagctaaatgaggtcttacctaag
ctaagtcctcttaatcctcagtatctaactaagaagcaaagtgtttttcagaagatgtcg
gcttttgttgagaagtttaaaggtgttggggggagggtgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (15)   

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