KEGG   Parageobacillus toebii NBRC 107807: DER53_09355
Entry
DER53_09355       CDS       T06505                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
ptb  Parageobacillus toebii NBRC 107807
Pathway
ptb00010  Glycolysis / Gluconeogenesis
ptb00020  Citrate cycle (TCA cycle)
ptb00260  Glycine, serine and threonine metabolism
ptb00280  Valine, leucine and isoleucine degradation
ptb00310  Lysine degradation
ptb00380  Tryptophan metabolism
ptb00620  Pyruvate metabolism
ptb00630  Glyoxylate and dicarboxylate metabolism
ptb00640  Propanoate metabolism
ptb00785  Lipoic acid metabolism
ptb01100  Metabolic pathways
ptb01110  Biosynthesis of secondary metabolites
ptb01120  Microbial metabolism in diverse environments
ptb01200  Carbon metabolism
ptb01210  2-Oxocarboxylic acid metabolism
ptb01240  Biosynthesis of cofactors
Module
ptb_M00009  Citrate cycle (TCA cycle, Krebs cycle)
ptb_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ptb_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
ptb_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:ptb00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    DER53_09355 (lpdA)
   00020 Citrate cycle (TCA cycle)
    DER53_09355 (lpdA)
   00620 Pyruvate metabolism
    DER53_09355 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    DER53_09355 (lpdA)
   00640 Propanoate metabolism
    DER53_09355 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    DER53_09355 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    DER53_09355 (lpdA)
   00310 Lysine degradation
    DER53_09355 (lpdA)
   00380 Tryptophan metabolism
    DER53_09355 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    DER53_09355 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ptb04147]
    DER53_09355 (lpdA)
Enzymes [BR:ptb01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     DER53_09355 (lpdA)
Exosome [BR:ptb04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   DER53_09355 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 GIDA FAD_oxidored FAD_binding_2 HI0933_like DAO FAD_binding_3 NAD_binding_8 UDPG_MGDP_dh_N 3HCDH_N AlaDh_PNT_C Amino_oxidase Thi4 fvmX5
Other DBs
NCBI-ProteinID: QIQ32975
UniProt: A0A6G9J2P2
Position
1807975..1809387
AA seq 470 aa
MVVGDFAIETDTLVVGAGPGGYVAAIRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALIS
ASHRYVEAKHSEDIGIKAENVTVDFSKVQQWKASVVKKLTSGVEGLLKGNKVEIVRGEAY
FVDANTVRVINGDSAQTYTFKNAIIATGSRPIELPGFKFSNRVLDSTGALSLQEVPKSLV
VIGGGYIGTELGTAYANFGTKVTIIEGADEILSGFEKQMTAIVKRRLKKKGVEIFTNALA
KGVEEREDGVTVTFEVKGETKTIDADYVLVTVGRRPNTDELGLEQIGIKLTDRGLIEIDK
QCRTSVPNIYAIGDIVQGPPLAHKASYEGKIAAEAIAGKPSEIDYLAIPAVVFSEPECAS
VGYFEQQAKDEGIDVVTAKFPFAANGRALSLNDTDGFMKLVVRKEDGVVIGAQIVGPNAS
DMIAELGLAIEAGMTAEDIALTIHAHPTLGEIAMEAAEVALGTPIHIISK
NT seq 1413 nt   +upstreamnt  +downstreamnt
atggtagttggcgattttgcaattgaaacggatacgcttgtcgttggagcgggtcctggt
ggttatgtagcagctattcgcgctgcacagttagggcaaaaagtaacgattgttgaaaaa
ggaaatcttggcggagtatgcttaaatgtcggatgtattccatctaaagcgctcatctcc
gcaagccatcgctatgttgaagcgaaacattcagaagacatcggaattaaagcagaaaac
gtaaccgttgatttttctaaagtgcaacaatggaaagcaagcgtcgtgaaaaaattaacg
agcggcgtggaaggattgctaaaaggaaacaaagtcgaaatcgtacgcggagaagcgtat
tttgttgatgcgaatacggtgcgtgttatcaatggtgatagcgcgcaaacatatacgttt
aaaaacgcaattattgcaacaggctctcgtccgatcgaacttcctggctttaaattttcc
aatcgcgtgcttgattccacaggcgcgctcagtctgcaggaagttccaaaatcgcttgtc
gtaatcggcggcggttatatcggaacagaattaggaacagcgtatgctaactttggaaca
aaagtaaccatcattgaaggagcagatgaaattttatctggttttgaaaaacaaatgacg
gcaattgttaaacgccgcttaaagaaaaaaggtgtagaaatctttactaacgctcttgct
aagggagtcgaagagcgcgaagacggtgtgacagtaacctttgaagtaaaaggcgaaacg
aaaacaattgatgcagactatgtgcttgtgacggtcggacgtcgtccgaacacggatgag
cttggcttagaacaaatcggcattaaattgacagaccgcggcttaattgaaattgacaaa
caatgccggacaagcgttccaaacatttatgccatcggtgatatcgtccaaggtccaccg
cttgcccataaagcatcatatgaaggaaaaatcgccgccgaagcgattgccggaaaaccg
tctgaaatcgattatttagctattccggcagtggtcttctccgagcctgaatgcgcatct
gtcggttattttgagcaacaggcgaaagatgaaggcatcgatgtagtaacggcgaaattc
ccatttgcggctaacggccgtgccctttcgttgaatgacacagacggctttatgaaactt
gtcgtccgcaaagaagatggcgttgtgatcggagcgcaaatcgttggtccaaacgcttct
gacatgattgcagagcttggtcttgcgattgaagcaggaatgactgcggaagatatcgct
ttgacgattcatgctcacccaacattgggtgaaatagcgatggaagctgcggaagttgcc
ctcggcactccaatccatattattagtaaataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (23)   
   KEGG PATHWAY (16)   
   KEGG MODULE (7)   
Chemical substance (27)   
   KEGG COMPOUND (27)   
Chemical reaction (11)   
   KEGG ENZYME (1)   
   KEGG REACTION (10)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (17)   
   Pfam (17)   
All databases (85)   

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