KEGG   Parageobacillus toebii NBRC 107807: DER53_16035
Entry
DER53_16035       CDS       T06505                                 
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
ptb  Parageobacillus toebii NBRC 107807
Pathway
ptb00300  Lysine biosynthesis
ptb00470  D-Amino acid metabolism
ptb01100  Metabolic pathways
ptb01110  Biosynthesis of secondary metabolites
ptb01120  Microbial metabolism in diverse environments
ptb01230  Biosynthesis of amino acids
Module
ptb_M00525  Lysine biosynthesis, acetyl-DAP pathway, aspartate => lysine
ptb_M00527  Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:ptb00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    DER53_16035 (lysA)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    DER53_16035 (lysA)
Enzymes [BR:ptb01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     DER53_16035 (lysA)
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: QIQ34063
UniProt: A0A6G9J5U0
Position
complement(3123484..3124803)
AA seq 439 aa
MFFHGTSRVNDKGHLEIGGVDTVDLAKEYGTPLYIYDVALIRERARGFKEAFQKHGVKAQ
VAYASKAFSSIAMVQLAEEEGLSLDVVSGGELYTALQAGFPPERIHFHGNNKSRDELMMA
LDHGVGCIVVDNFYELELLEQLSKQYGKKTAILLRVTPGVEAHTHDYILTGQEDSKFGFD
LNNGQADEALQKALSSPHFSVMGIHCHIGSQIFETTGFVLAAQKIFQKIGQWKETYGFIP
TVVNLGGGFGIRYTSDDDPIPVSEYVDQIVEEVKKQASEKNIPMPEIWIEPGRSLVGDAG
TTIYSIGSRKEVPNVRHYVAVDGGMSDNIRPALYDAKYEAVLANRVLDEKNEIVAIAGKC
CESGDMLIWDLPLPKASPGDYLAVFCTGAYGYSMANNYNRIPRPAVVFVENGEAQLVVKR
ETYEDLVRLDVPLKTKVNK
NT seq 1320 nt   +upstreamnt  +downstreamnt
atgttttttcatgggacaagccgtgtcaatgacaaggggcatttagaaattggcggtgtc
gataccgttgatttagcgaaagaatatggaacaccattgtatatttatgatgtggcactc
attcgtgagcgtgcgcgggggtttaaagaagcgtttcaaaaacatggcgtcaaagcacaa
gttgcctatgcaagcaaggcattttcttccattgcgatggttcagttagcagaagaagaa
ggattatcgttggatgtagtgtcaggaggagagctgtatacagcattgcaagcgggattt
ccgccagaacgcatccattttcatggaaataataaaagtcgcgacgaattaatgatggcc
cttgatcatggagtcggatgcattgttgtcgataacttttatgaactggaattgttggaa
caactaagcaagcagtacggaaaaaaaacggcgattttactaagagtcacccctggtgtg
gaggcgcatacgcacgattatattttaaccggtcaggaagattcaaaatttgggtttgat
ttgaacaatggccaagcagatgaagcgctgcaaaaagcgctatcttccccgcatttttcc
gtaatgggaattcactgccatatcggttcgcaaattttcgaaacgacaggatttgtgttg
gcggcacaaaaaattttccaaaaaattggtcagtggaaggaaacgtacggatttattcca
acggttgtcaatcttggcggtggatttggcattcgctatacgagtgatgacgacccgatt
cctgtctcggaatacgtcgaccaaattgtagaggaagtaaagaaacaagcaagcgaaaaa
aatattccaatgccagaaatctggattgagccgggacgctcccttgtcggcgatgcggga
acgacgatttattcgatcggttcgcgcaaagaagtgccgaatgtccgtcattacgttgcg
gtagacggagggatgagcgacaatatccgcccggcgctatatgatgcgaagtatgaagcg
gtgttagcgaatcgagtgttggacgaaaaaaatgaaattgtcgccatcgccgggaagtgt
tgtgaatcaggagatatgcttatttgggatttgccgctgccaaaagcatcccctggcgat
tatttagccgttttttgcactggggcgtatggctattcgatggcgaacaactataaccgc
attccacgtccagctgtcgtgtttgtggaaaatggagaagcacaactcgttgttaaacgg
gaaacgtatgaagatttagtgcggcttgatgtaccgcttaaaacaaaagtgaataagtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (10)   
   KEGG PATHWAY (6)   
   KEGG MODULE (4)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (24)   

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