KEGG   Candidatus Phycorickettsia trachydisci: phytr_2630
Entry
phytr_2630        CDS       T05372                                 
Name
(GenBank) excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
ptc  Candidatus Phycorickettsia trachydisci
Pathway
ptc03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ptc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    phytr_2630
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ptc03400]
    phytr_2630
DNA repair and recombination proteins [BR:ptc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     phytr_2630
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      phytr_2630
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N nSTAND1 DnaJ_CXXCXGXG AAA_29 RsgA_GTPase AAA_16 nSTAND3 YobI-ATPase AAA_21
Other DBs
NCBI-ProteinID: AVP87219
UniProt: A0A2P1P7H8
Position
303142..305994
AA seq 950 aa
MQDFIEVVGAKEHNLKNVTVKIPKYKLIAITGLSGSGKSSLAFDTIYAEGQRRYVESLSS
YARQFLELHNKPDVESISGLSPAIAIDQKTTSKNPRSTVGTITEIYDYLRLLFARVGVPY
SPVTGKPITAQTVTEIVSSIKSLPEGVRLYILGPIARGEKGEFKKDIQHYQKQGYERIIV
DDYLSSLDQEFKIDKNKKHNIEIVVDRIVISDELGNRLAESVEQAMKIGRGIMYAQVTHI
PEEVQDFEYKVGERLIFSSSYACPISGFQLEEIEPRIFSFNSPFGACKKCEGSGKQMTFD
PDLIVPNKNLSINEGAIKPWDMSNNAVRHVLNSLAKHYGFSLDEPFSTLTQKVKQILMNG
SENEEIIFTAYDDFKSISNKSPFGGILKSLTEKLQNTSSDSMRFELEKFMTENVCHVCSG
YRLKESSLYVKILGKHIGEVCKLSIRDTLAWVSLLPNKLSAKEVNIAGRVVKEVKERLQF
LVNVGLDYLQLARESSTLSGGESQRIRLASQIGSGLTGVLYVLDEPSIGLHQRDNARLID
TLKHLKELGNTVIVVEHDYDTILSCDHVVDVGPGAGIHGGEIIAQGTVREVIDDPNSITG
QYLSGKKSIPLPKQRRMASKFLDLKGATANNLKNVDVQVPLGILTVVTGVSGGGKSSLII
HTLYKAIQKYLEVSSKAVPGPFRELKGLEHIDKIIDIDQSPIGRTPRSNPATYTGLFNHI
RDWFAELPESKARGYKISRFSFNVKGGRCESCQGDGMIKIEMHFLPDVYVKCDACNGKRY
NRETLEIKYKDKSIADILDMTAEDAMYFFEKVPSIADKLKVLYQVGLGYMKIGQSATTLS
GGEAQRIKLAKELSKRSTGKTMYILDEPTTGLHFEDISKLLEVLHHLVDLGNTVLIIEHN
MDVIKTADHIIDVGPEGGDLGGEIVVAGSPQDVVNCPQSLTGKYLKDHLR
NT seq 2853 nt   +upstreamnt  +downstreamnt
atgcaggattttattgaagtagtaggggcgaaggagcacaatttaaagaacgtaacggtc
aaaattcctaaatataaactaattgcaattactggtcttagtggatctggtaaatcatcc
cttgcattcgatacaatatacgcagagggacaaaggcgttacgtagaaagtttgtcatca
tatgccaggcaatttttagagttacataataaaccagacgtagaatctatcagcggtctt
tcaccagcgattgctattgatcaaaaaactacttctaaaaatcctagatcaactgttgga
accattactgaaatatatgattacttaaggcttttatttgcaagagtgggggttccatac
tctcccgttactggtaagcctatcactgcgcaaactgtaacggaaatagttagctctata
aaatctctgcctgaaggagtcagactatatatcttaggacctattgctaggggtgagaaa
ggagaattcaagaaagatattcaacattatcaaaagcaaggttatgaaaggataatcgtc
gatgattatcttagttccttggatcaagaatttaagatagataaaaataaaaagcataat
attgagattgtagttgatcgtattgtgatttctgatgagcttggcaataggcttgcagaa
agtgtggagcaggctatgaaaattggtagaggtataatgtatgctcaagttactcatatc
ccggaagaagttcaagattttgaatacaaggtaggtgagcgtttaattttttcatctagt
tacgcatgtccaatttcaggttttcagttggaagaaatagagccaagaattttttctttt
aatagtcctttcggtgcatgtaaaaagtgtgaaggttcgggtaagcagatgacttttgat
cctgatttaattgtgcctaataaaaacttaagcattaatgagggtgctattaaaccttgg
gatatgagtaataatgccgtgaggcatgttttgaattctttagctaagcattatggtttt
agtttagatgaaccgttttctactctgacccaaaaggttaagcaaattcttatgaatggg
tctgaaaatgaagagataatatttaccgcatatgatgatttcaaaagcataagtaataaa
agtccctttggaggtattttgaaaagtttgacagagaagttgcaaaatacttcatctgac
tcaatgcgatttgagttagaaaaatttatgacagagaatgtttgccatgtatgtagtggt
tatagactcaaagaatcgtctttgtatgtcaaaatattgggtaagcatataggagaagtc
tgcaagctcagtattagagacactctggcttgggttagtctcttaccaaataaattaagt
gccaaggaagttaatattgccggtagagttgttaaggaggtaaaagaaagattgcagttt
ttggtgaatgttggacttgattatctgcagcttgcacgtgagtctagtacactttcagga
ggagagagtcagagaattagacttgcgtctcaaattggatctggtttaacgggagttttg
tatgtattagatgagccttctattggtcttcatcaaagagataacgcacgtttaattgat
actctaaaacatttaaaagaactaggtaataccgttatagttgttgagcatgattacgat
actattttgagctgtgatcatgttgtggacgttggtcctggtgctggtattcatggaggg
gagatcatcgcgcaaggcactgttcgagaagttattgatgatccaaatagcattacgggt
cagtatttaagtggtaaaaaatccatacccttacctaaacagagaaggatggcatctaaa
tttcttgatttaaagggtgcaactgctaataacttaaagaatgttgatgtacaagttccc
ttaggtattttaacagtagtaacaggtgtatctggtgggggaaaatctagtttgattatc
cataccctttacaaggctatacagaaatatttggaagtatcatctaaggcagtacctgga
ccttttagagaattaaaaggtttggaacacattgataagattatagatatagaccagtcg
ccaattggtaggactccaagatctaatcccgcaacttatacaggtttatttaaccatata
cgtgattggtttgcagaactgcctgaatcaaaggccagggggtacaaaatcagccgcttt
tcctttaacgttaaaggtgggcgttgcgagagttgtcaaggtgatggaatgatcaagata
gagatgcactttttgccagatgtatatgtgaagtgtgatgcttgcaacggtaagagatat
aatcgtgagactttagagattaagtataaagacaagtcgattgccgatatacttgatatg
actgctgaagatgcaatgtacttttttgaaaaggtaccaagtattgccgataagcttaaa
gtcctctatcaggttggtcttggttatatgaaaataggccaatctgctacgaccttatca
ggaggtgaggcgcagaggattaagcttgctaaggagctttccaagagatcgactggtaag
acaatgtatatcttggatgagccgaccacgggtttgcatttcgaagatattagtaagtta
ttagaggtgcttcatcacttagtggatttaggtaatactgtgcttattattgagcataat
atggacgtaattaaaaccgctgatcatattattgatgttggtcctgaaggtggtgactta
ggtggagagatagtagtagcggggtctccgcaagatgtagtaaattgtccgcaaagtttg
acgggcaaatatttaaaagatcatttaagataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (12)   
   Pfam (12)   
All databases (20)   

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