KEGG T05372: phytr

Candidatus Phycorickettsia trachydisci: phytr_2820

Entry

phytr_2820        CDS       T05372

Name

(GenBank) DNA-binding protein HU

K03530

DNA-binding protein HU-beta

Organism

ptc Candidatus Phycorickettsia trachydisci

Brite

KEGG Orthology (KO) [BR:ptc00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ptc03032]
    phytr_2820
   03036 Chromosome and associated proteins [BR:ptc03036]
    phytr_2820
   03400 DNA repair and recombination proteins [BR:ptc03400]
    phytr_2820
DNA replication proteins [BR:ptc03032]
Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    phytr_2820
Chromosome and associated proteins [BR:ptc03036]
Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    phytr_2820
DNA repair and recombination proteins [BR:ptc03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      phytr_2820

SSDB

Motif

Pfam:

Bac_DNA_binding HU-HIG HU-CCDC81_euk_1 HU-CCDC81_bac_2 HU-DNA_bdg

Other DBs

NCBI-ProteinID:

AVP87238

UniProt:

A0A2P1P7J3

Position

326261..326548

AA seq 95 aa
MNKEEFIAFIAKEKSVTKKAADEIISNFVDSVISAMEKGQSVNLIGFGSFYLIPMKARKG
VNPKTKAPMMIDAYVKPNFKPGQWLKTAANKSNKK

NT seq 288 nt +upstreamnt +downstreamnt
atgaataaagaagagtttatcgcttttatagcaaaagaaaagtctgtcactaagaaagca
gctgacgaaattatttctaatttcgtagattctgtaatcagcgctatggaaaaaggacaa
tctgtcaatcttatcggttttggtagcttttacctaattcctatgaaggctagaaaagga
gtgaatcctaaaactaaagctccaatgatgattgatgcttatgttaaacctaattttaag
cctggacaatggcttaaaactgcggctaacaaaagcaataaaaaataa

All links

Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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