KEGG   Candidatus Phycorickettsia trachydisci: phytr_3470
Entry
phytr_3470        CDS       T05372                                 
Name
(GenBank) tRNA pseudouridine synthase A
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
ptc  Candidatus Phycorickettsia trachydisci
Brite
KEGG Orthology (KO) [BR:ptc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ptc03016]
    phytr_3470
Enzymes [BR:ptc01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     phytr_3470
Transfer RNA biogenesis [BR:ptc03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    phytr_3470
 Prokaryotic type
    phytr_3470
SSDB
Motif
Pfam: PseudoU_synth_1
Other DBs
NCBI-ProteinID: AVP87300
UniProt: A0A2P1P7Q3
Position
complement(393437..394177)
AA seq 246 aa
MPRYKALIEYCGTNYQGWQKQASPNTIQGKLEDALFKFSEKQINVIGSSRTDTGVHALGQ
VAHFDLPKEYEIERIFRGINFYLQDEEISLLKVEKIPREFHSRALATHRHYQYIIINRPA
PITLDKYKALWIPQKLDVKRMQEGAKFLIGHHDFSSFRSSECRSRSPIKHLTKLDIKQTE
DKIFIYASANSFLHHMVRNIVGTLLLVGRNQIEPETIREILEAKSRSAAGPTSPAWGLYL
IKVSYN
NT seq 741 nt   +upstreamnt  +downstreamnt
atgccaagatacaaagccttaatagaatattgtggtacaaactatcaaggctggcaaaaa
caagcatctcctaatacaatacaaggtaagttagaagatgctttgtttaaattctccgaa
aaacaaatcaacgttataggatcaagcagaacagatacgggggttcatgctttaggtcaa
gtagctcattttgatctacccaaagagtatgaaattgagagaatttttagaggcatcaat
ttttatttgcaagatgaagaaatatctttgcttaaagtagaaaaaattccaagggaattt
cattcaagagctctggccacacatagacattatcaatacattatcataaaccgccctgct
ccaattaccttagataaatacaaagcactttggataccgcaaaaattggatgtgaagagg
atgcaagagggagccaaatttttaatcggacatcatgatttttcttcttttcgttcatca
gaatgcagatctcgtagtcctattaaacatctaacaaaactagatattaaacaaactgaa
gataagatatttatatatgccagtgctaattcctttctgcatcatatggttcgcaacatt
gttggtactttgttattagtcggaagaaatcaaattgagcccgaaactattagagaaatc
ctagaagcaaaatcccgcagtgcagccggtcccacctctcctgcatggggattatattta
ataaaagtgagttataattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

Download RDF
DBGET integrated database retrieval system