KEGG T05282: PTET

Pseudoalteromonas tetraodonis: PTET_a0274

Entry

PTET_a0274        CDS       T05282

Symbol

rep

Name

(GenBank) ATP-dependent DNA helicase Rep

K03656

ATP-dependent DNA helicase Rep [EC:5.6.2.4]

Organism

ptd Pseudoalteromonas tetraodonis

Brite

KEGG Orthology (KO) [BR:ptd00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ptd03400]
    PTET_a0274 (rep)
Enzymes [BR:ptd01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     PTET_a0274 (rep)
DNA repair and recombination proteins [BR:ptd03400]
Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    PTET_a0274 (rep)

SSDB

Motif

Pfam:

UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_30 ResIII AAA_11 AAA_22 PhoH

Other DBs

NCBI-ProteinID:

ATD01859

Position

I:278014..280032

AA seq 672 aa
MKLNPKQDEAVKYISGPCLVLAGAGSGKTRVITNKIAYLVQKCEYQARNIAAVTFTNKAA
KEMRERVLQTLGKQESKGLWVSTFHTLGLEIIKKELKTLGFKPGFSLFDDQDTNQLLGDL
TEDELKKDKDLLNLLKMQIGSWKNELILPEQAIREAREPQKALFAQLYARYQNQLRAYNA
LDFDDLIMIPTLLLSSNATSRERWQQRFRYLLVDEYQDTNTSQYQLVKLLVGERARFTVV
GDDDQSIYSWRGARPQNLVLLSKDYPGLRLIKLEQNYRSAGRILKAANILIANNPHEFEK
KLFSELGYGEQIKVIGCRDEEHESERVVAEIISHKFMKRTSYKDYAILYRGNHQARGFEK
SLMSNRIPYKISGGMSFFSRSEIKDIMAYLRLLVNQDDDNAFLRIVNTPRREIGTVTLEK
LGTLANEKHQSLFATCFDNDLGYRLKGRGFNALAGFARWVVELSDNAVRSDTLEAVKDLV
RNINYEAYLYESSPSAKAAEMRMKNVSELYRWITDMLTGDADNPPMTLAEVVSKLTLRDM
LERNEEEDEADAVQLLTLHASKGLEYPYVFMVGMEEGLLPHQVSIDEDNVDEERRLAYVG
ITRAQQELTLTYAKIRRQFGETSQTELSRFVQELPQDDLAFENKKAPNTQAERMEKGQAR
VANLRAMLKKPQ

NT seq 2019 nt +upstreamnt +downstreamnt
atgaaactcaatcctaaacaagatgaagcggtaaagtacattagtggtccttgcttagta
ttagctggcgcaggctcgggtaaaacacgagttatcaccaacaaaattgcttacttagta
cagaagtgtgagtatcaagcgcgtaatattgcggcggttacctttaccaataaagcggct
aaagaaatgcgcgagcgggttttgcaaaccttaggaaagcaagagtctaaaggtttatgg
gtctctacatttcatacactcgggcttgaaatcatcaaaaaagagttaaaaacactgggt
tttaagcctggtttttcgctgtttgacgaccaagatacgaatcaactactcggtgattta
accgaagatgagcttaaaaaagacaaagacttacttaatctacttaaaatgcaaattggt
agctggaagaatgaactcattttaccagagcaagctattcgcgaagccagagagccacaa
aaagccttgttcgctcaattgtacgcacgctatcaaaaccaacttcgcgcttataatgca
ctcgactttgatgatttaattatgatccccacgctgcttttaagcagtaacgccacttca
cgtgaacgttggcagcagcgttttcggtatttactggtggatgaataccaagatactaat
accagccaataccaattagtaaaattgctggttggtgaacgtgcacgctttactgtggta
ggagatgacgatcagtcaatttactcttggcgtggtgctcgcccacaaaacttggtgcta
ttaagtaaagactatccaggattaagattaataaaactagagcaaaattaccgtagtgca
gggcgcattcttaaagcggctaatatattaattgcaaataacccccatgagtttgaaaaa
aagctctttagtgaacttggctatggtgagcaaattaaagtcattggttgtcgcgatgaa
gagcatgagtctgagcgtgtggttgcagagattatttctcataagtttatgaagcgcacc
agctataaagattacgcgattttgtaccggggtaatcaccaagcgcgtggttttgaaaag
tcgttaatgagtaaccgtataccttataaaattagcggcgggatgtcgtttttttcacgt
tctgaaattaaagatatcatggcttacttacgtcttttagtgaaccaagatgatgacaat
gcctttttaagaatcgtgaatacgccacggcgtgaaataggcacggtgacgcttgaaaaa
ctaggcaccttagccaatgaaaaacatcaaagcttgtttgccacctgttttgataacgac
ttaggatacagactaaaaggacgtggttttaatgcgttagctgggtttgcccgttgggtg
gttgagctgtcggataacgcagtacgcagcgataccttagaagcggtcaaagatttagtg
cgaaatattaattatgaagcctatttatatgaatcatcaccgagtgccaaagccgccgaa
atgcggatgaaaaatgtctcggagctgtaccgttggatcaccgatatgctgactggcgat
gccgataatccgccaatgacgttagctgaagtggttagtaaattgaccctgcgcgatatg
ctagagcgtaacgaggaagaagatgaagcagatgcagtacaattacttacgctgcatgct
tcaaagggactcgagtacccttatgtatttatggtaggcatggaagaggggctattacca
caccaagtaagcattgatgaggataatgtagatgaagagcgccgccttgcctatgtaggt
attacccgcgcgcagcaagagctaaccttaacgtatgctaaaattcgtcgtcaatttggt
gaaacatcgcaaacggagctcagccggtttgtgcaagagctaccacaagatgacttagcc
tttgaaaacaaaaaagcgcctaatactcaagctgaacgcatggaaaaaggccaagctcgg
gttgcaaatttaagggcaatgctaaaaaaaccacaatag

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (17)   

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