KEGG   Pseudoalteromonas tetraodonis: PTET_a2896
Entry
PTET_a2896        CDS       T05282                                 
Symbol
srmB
Name
(GenBank) ATP-dependent RNA helicase SrmB
  KO
K05590  ATP-dependent RNA helicase SrmB [EC:5.6.2.7]
Organism
ptd  Pseudoalteromonas tetraodonis
Brite
KEGG Orthology (KO) [BR:ptd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ptd03009]
    PTET_a2896 (srmB)
Enzymes [BR:ptd01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     PTET_a2896 (srmB)
Ribosome biogenesis [BR:ptd03009]
 Prokaryotic type
  rRNA helicases
   PTET_a2896 (srmB)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 UvrD-helicase AAA_22 AAA_30 PhoH AAA_11 SNF2-rel_dom Phage_integrase
Other DBs
NCBI-ProteinID: ATD04166
Position
I:2790733..2791959
AA seq 408 aa
MQFSEFDLDDKLLNAINKMGYETPTSIQQQAIPEALQGRDILASAPTGTGKTAAFLIPAI
QYLMDFPRRDPGFARVLIMTPTRELAYQIHEQCELLAKQTQLKIGVVTGGINYGTHKEIF
ENNNDILIATPGRLMEYLETENFHAENVEMLILDEADRMLDMGFRKEMLRICDEAKNRRQ
CFLFSATLEGDSVELFAERILNDPALLEAESSRKEKAKIHQWVHLADDYRHKLELLVNTL
NGPDVSKAIVFVKTRERLETLIGELTNNGVKAAWLRGEMPQDKRMKAMENFHSGKTRILV
ATDVAARGIDVADISHVINFDMPRTADVYVHRIGRTGRAGKKGIAISLIEAHDIGILYKV
ERYIEQKLKRRVFKGLEPKHKEAKPPVKKRKDPVKMKAKKKAKAKKKK
NT seq 1227 nt   +upstreamnt  +downstreamnt
atgcaattttctgaatttgatcttgatgataagctactcaatgctattaataaaatgggc
tatgaaacccccactagcattcaacaacaagccattcctgaggcgttgcaaggacgcgat
attttagcgtcggcaccaacaggtacgggtaaaacggcggcatttttaattccggcaatt
caatatttaatggatttcccacgtcgtgatccgggttttgcacgggtattaattatgacc
ccaacgcgcgagcttgcttatcaaattcatgaacaatgtgagttacttgcaaaacaaacc
cagttaaaaattggggtggttaccggcggtataaactacggtacacacaaagaaattttt
gaaaataataatgacattttaatcgccacacctgggcgtttaatggaatatttagaaacc
gaaaacttccatgcagaaaacgtagaaatgctcattcttgatgaagccgaccgcatgctc
gacatgggttttcgtaaagaaatgctgcgcatttgtgatgaagctaaaaaccgtcgtcag
tgctttttattctcagctactcttgaaggtgacagcgtagaattatttgcagagcgtatt
ttaaacgatcccgcgctacttgaagccgaatcatcacgcaaagaaaaagctaaaattcat
caatgggttcatttagccgacgactaccgccataaactagagctattagttaacacctta
aatggccctgatgtaagtaaagcgattgtgtttgtaaaaacccgtgagcgccttgaaacc
ctaattggtgagcttactaataacggcgtaaaagctgcgtggttacgtggtgaaatgcca
caagacaaacgcatgaaagccatggaaaacttccacagtggcaaaacccgtattttagtc
gctaccgatgtagcggcccgcggtattgatgtagctgatataagccacgtaattaatttt
gatatgcctcgcactgcagatgtatacgtacaccgtattggccgtacaggtcgcgcaggt
aaaaaaggtattgcaatttcactcattgaagcgcacgacattggcatactttacaaagta
gaacgttacatagagcaaaagctaaaacgccgtgtatttaaaggattagagccaaagcat
aaagaagccaagccaccggttaaaaagcgtaaagatccagtaaaaatgaaagcaaagaaa
aaagccaaagctaaaaagaaaaaatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (11)   
   Pfam (11)   
All databases (18)   

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