KEGG   Parasteatoda tepidariorum (common house spider): 107442666
Entry
107442666         CDS       T06106                                 
Name
(RefSeq) polyadenylate-binding protein 4-like
  KO
K13126  polyadenylate-binding protein
Organism
ptep  Parasteatoda tepidariorum (common house spider)
Pathway
ptep03015  mRNA surveillance pathway
ptep03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ptep00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    107442666
  09123 Folding, sorting and degradation
   03018 RNA degradation
    107442666
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ptep03019]
    107442666
   03041 Spliceosome [BR:ptep03041]
    107442666
Messenger RNA biogenesis [BR:ptep03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     107442666
   mRNA cycle factors
    Stress granule specific factors
     107442666
Spliceosome [BR:ptep03041]
 Complex C
  Other components
   Complex C specific factors
    107442666
SSDB
Motif
Pfam: RRM_1 PABP RRM_occluded RRM_7 RRM_5 YflT RRM_3
Other DBs
NCBI-GeneID: 107442666
NCBI-ProteinID: XP_042913680
Position
Unknown
AA seq 654 aa
MSMNPNGPNYPIASLYVGDLHNDVTEAMLFEKFSTAGPVLSIRVCRDLIARRSLGYAYVN
FQQPVDAERALDTMNFDMIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDT
FSAFGNILSCKVATDEDSNSKGYGFVHFETEEAANNAIVKVNGMLLNGRKVFVGRFIPRS
EREKQLGQKARRFMNVYIKNFADDLDDEKLREMFEKYGKITSAKVMTDDSGKVKGFGFVS
FEDPENAEKAVNDLNGKEYNGKTLYVGRAQKKSERVAELKRRFEQLKMDRINRYQGVNLY
VKNLDDSIDDERLRKEFTPFGTITSAKVMTDGNGRSKGFGFVCFSAPEEATKAVTEMNGR
IVSSKPLYVALAQRKEERKAHLASQYMQRIAGMRMQLGQMFNPGNAGYFVPTMPQTQRNF
YPQMAQMRATPRWTTNAPIRPGAQPTAAFQAMQSAPFTRAAARPAVAAAQNPGIRAGMTA
RPIIGQPNVAGAASAAAGSRVTSMASSGVGAARPVGGVPVANINQGRPAAYKYTSNMRNP
PQQPQTAQQAAAAQQQAINQQAVRIEGHIPLTPSMLAEANPQEQKQMLGERLFPSIHTMF
PDLAGKITGMLLEIDNSELLHMLEHTEALKTKVEEAVAVLQAHHAKEGAIKNQS
NT seq 1965 nt   +upstreamnt  +downstreamnt
atgtcgatgaatccaaatggtccaaattatcccattgcttcattgtacgttggagatctt
cataatgatgttactgaagccatgctttttgaaaaattctcaactgctggtcccgtttta
tctataagagtctgtcgtgatcttattgcacgtagatctcttggttatgcgtatgtgaat
ttccaacagcctgttgatgcggagagagccttagacacaatgaattttgatatgatcaag
ggtagacccattcgtattatgtggtcccaaagagatccctccttaaggaaatctggagtg
ggcaatgtcttcattaaaaatctagataagagtattgacaataaggccatgtatgataca
ttttctgcctttggaaatattttgtcatgcaaggttgctacagatgaagatagtaattct
aaagggtacggtttcgtccactttgaaaccgaagaagcagctaataatgccattgttaaa
gtaaatggtatgcttcttaatggaagaaaagtatttgtcgggaggtttataccccgtagt
gaacgagaaaagcagttgggacaaaaagctagacgattcatgaatgtgtacatcaaaaat
ttcgctgatgatcttgatgatgagaagcttcgtgaaatgtttgaaaagtatggaaagatt
acaagtgcaaaggttatgactgatgattctggtaaagtcaaaggctttggatttgttagt
tttgaagacccagaaaatgcagaaaaggctgttaatgatctcaacggaaaagaatacaat
ggcaaaactttgtatgttggacgtgctcagaaaaaatctgagagagttgcggaattgaag
cgtagatttgaacaacttaaaatggatcgcattaacagataccaaggtgtgaacttgtat
gttaaaaatcttgatgattctattgatgatgaacgattaagaaaagagtttacacctttt
ggaactattacgagtgcaaaggttatgacagatggcaatgggcgatccaagggatttggc
tttgtgtgcttcagtgctcctgaagaggctacaaaagctgtcactgaaatgaacggcaga
attgtttcctctaaaccattgtatgttgcacttgctcagcgtaaagaagaacgtaaggct
catttggcttcacaatatatgcaacgtattgcaggaatgagaatgcagcttggacagatg
ttcaatcctggaaatgctggatatttcgtacctacaatgcctcaaacccaacgtaacttc
tatcctcaaatggctcaaatgagagctactcctcggtggactactaatgctccaattaga
cctggggctcagccaacagcagctttccaggctatgcagtcagctccatttactagagct
gctgcacgacctgctgttgctgctgctcaaaatcctggtataagagctggaatgactgct
agacctattattggacagcctaatgttgctggagctgcttctgctgctgcgggatcaagg
gttacttctatggcttcctcaggtgttggtgctgcccgtccagttggcggggttcctgtg
gctaacattaaccaaggccgtcctgctgcttacaagtatacttcaaacatgcgaaatcca
cctcagcaaccacaaacagctcaacaagctgcagcagctcagcaacaagctattaaccaa
caagctgtacgaattgaaggccacatacctttgactccgtctatgttggctgaagcaaat
cctcaagaacagaagcaaatgcttggagagcgattgttcccctcaattcacaccatgttc
ccagacttagctggaaagatcactggcatgttattggagatcgataattctgaattgctg
catatgttggagcacactgaagctttaaaaacaaaggttgaagaagctgtcgcagttttg
caagctcatcatgccaaagaaggagccataaaaaatcaatcatag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (7)   
   Pfam (7)   
All databases (24)   

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