KEGG   Paraburkholderia terrae: C2L65_01620
Entry
C2L65_01620       CDS       T05318                                 
Name
(GenBank) RNA polymerase sigma-54 factor
  KO
K03092  RNA polymerase sigma-54 factor
Organism
pter  Paraburkholderia terrae
Pathway
pter02020  Two-component system
pter02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:pter00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    C2L65_01620
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    C2L65_01620
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pter03021]
    C2L65_01620
Transcription machinery [BR:pter03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     C2L65_01620
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_IclR HTH_38 HTH_Crp_2 HTH_23 TRF
Other DBs
NCBI-ProteinID: AUT58435
UniProt: A0A2I8EFQ9
Position
1:complement(352737..354257)
AA seq 506 aa
MKASLQLRLSQHLALTPQLQQSIRLLQLSTLELQQEVSMAISQNPLLETEDDWIASPLRV
AADGTVISQTSQNTSPEGMSSSPPSSSSSTSSGESQENGEPQGVDEYNGMGSDSNSDANQ
WNLDDYGRSGNASDDDDLPPLQIHESTTTLRDHLTAQLRVTGASARDRALITFLIESLDD
DGYLTATFDEILTDLPEELEVDTDELNAALALLHSFDPAGVGARSASECLRLQLCRLEPS
PTRTLALDIVAHHLELLAARDFTRLRKYLKASDDDLREAHALIRSLEPFPGAAYGKAEAD
YVVPDIMVRKTAQGWQAELNPEVVPKLRINHLYANILRNNRGDPGSGSLRQQLQEARWLI
KNIQQRFETILRVAQAIVERQKNFFAHGEIAMRPLVLREIADTLGLHESTVSRVTTGKYM
LTPFGTLEFKYFFGSHVSTDTGGAASSTAIRALIKQLIGAEDTKSPLSDSRIAELLAEQG
FVVARRTVAKYREALKIPAVNLRKSL
NT seq 1521 nt   +upstreamnt  +downstreamnt
atgaaagccagcctccaactccgcctgtcgcagcatcttgcgctgacaccacaactgcaa
cagtccatccggctgctgcagctgtctacgcttgaactgcagcaggaagtgtcgatggcg
atctcccagaatccgctgctcgaaacggaagacgactggatcgccagtccgttgcgcgtc
gccgccgacggcacggtcatctcgcagacgtcgcagaacacctcgccggaagggatgtcg
agttcgccgccgtcctcgtcgtcgtccacttcctccggcgaaagccaggagaacggcgaa
ccccagggcgtcgacgaatacaacggcatgggttcggactcgaactcggatgccaaccag
tggaatctcgacgactacggccgttcgggcaacgcatcggacgacgacgatctgccgccg
ctgcaaatccacgaatcgaccacgacgctgcgcgatcacctgactgctcaacttcgtgtc
acgggagcaagcgcacgcgaccgcgcgctcatcacgttcctgatcgaatcactcgacgac
gacggctatctgacggccaccttcgacgaaatcctcaccgatctccccgaagaactggag
gtcgataccgacgaactcaacgcggccctcgccttactgcacagcttcgacccagcgggt
gtcggcgcgcgttcggcgtccgaatgcctgcgtttgcagttgtgccggctcgagccctcg
cccacgcgcacgctcgcgctcgacatcgtcgcgcatcatctggagctgctcgccgcgcgc
gacttcacgcgtctgcgcaaatacctgaaggcaagcgacgacgatctgcgcgaagcgcat
gcgctgatccgctcgctggagccattccccggcgcggcctacggtaaggccgaagcggac
tacgtcgtgcccgacatcatggtgcgcaaaacggcacagggatggcaggcggaactgaat
cccgaagtcgtgccgaaactgcgtatcaaccatctgtacgcgaatatcctgcgcaacaat
cgcggcgatccgggcagtggttcgctgcggcagcaactgcaggaagcgcgttggctgatc
aagaatatccagcagcggttcgagacgatcctgcgtgtcgcacaagcaattgtggagcgt
caaaagaactttttcgcccacggcgaaattgccatgcgccccttggttttgcgggaaata
gctgatacgctgggtttacacgagtcgacggtctcacgtgtgacaaccggcaagtacatg
ctcaccccattcgggacgcttgaatttaagtacttcttcggatcgcacgtatccaccgac
acggggggcgcggcctcttcaacggccattcgcgcactcatcaagcaactgataggagcg
gaagacaccaaatctcctctttcagacagccgcattgccgaactgctggcggaacagggt
ttcgtcgtcgctcgccgtaccgttgcgaaataccgcgaagcactgaagatcccagcagtc
aatctgcgcaagtctctttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (17)   

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