KEGG   Panthera tigris altaica (Amur tiger): 102959890
Entry
102959890         CDS       T02988                                 
Symbol
THOC2
Name
(RefSeq) THO complex 2
  KO
K12879  THO complex subunit 2
Organism
ptg  Panthera tigris altaica (Amur tiger)
Pathway
ptg03013  Nucleocytoplasmic transport
ptg03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ptg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    102959890 (THOC2)
  09122 Translation
   03013 Nucleocytoplasmic transport
    102959890 (THOC2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ptg03019]
    102959890 (THOC2)
   03041 Spliceosome [BR:ptg03041]
    102959890 (THOC2)
Messenger RNA biogenesis [BR:ptg03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     102959890 (THOC2)
Spliceosome [BR:ptg03041]
 Complex C
  Other components
   EJC/TREX
    102959890 (THOC2)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    102959890 (THOC2)
SSDB
Motif
Pfam: Tho2 THOC2_N Thoc2
Other DBs
NCBI-GeneID: 102959890
NCBI-ProteinID: XP_007091775
Position
Un
AA seq 1556 aa
MAAATVVVPVEWIKNWEKSGRGEFLHLCRILSENKSHDSSTYRDLQQALYELSYHVIKGN
LKHDQASNVLNDIFEFREDMPSILADVFCILDIETNCLEEKSKRDYFTQLVLACLYLVSD
TVLKERLDPETLESLGLIKQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELG
QDLSGNITSDLILENIKSLIGCFNLDPNRVLDVILEVFECRPEHDDFFISLLESYMSMCE
PQTLCHILGFKFKFYQEPNGETPSSLYRVAAVLLQFNLIDLDDLYVHLLPADNCIMDEHK
REIVEAKQIVRKLTMVVLSSEKIDEREKEKEKEEEKVEKPPDNQKLGLLEALLKIGDWQH
AQNIMDQMPPYYAASHKLIALAICKLIHITIEPLYRRVGVPKGAKGSPVNALQNKRAPKQ
AESFEDLRRDVFNMFCYLGPHLSHDPILFAKVVRIGKSFMKEFQSDGSKQEDKEKTEVIL
SCLLSITDQVLLPSLSLMDCNACMSEELWGMFKTFPYQHRYRLYGQWKNETYNSHPLLVK
VKAQTIDRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYILSQIQKYDNLITPVVDS
LKYLTSLNYDVLAYCIIEALANPEKERMKHDDTTISSWLQSLASFCGAVFRKYPIDLAGL
LQYVANQLKAGKSFDLLILKEVVQKMAGKEITEEMTMEQLEAMTGGEQLKAEGGYFGQIR
NTKKSSQRLKDALLDHDLALPLCLLMAQQRNGVIFQEGGEKHLKLVGKLYDQCHDTLVQF
GGFLASNLSTEDYIKRVPSIDVLCNEFHTPHDAAFFLSRPMYAHHISSKYDELKKSEKGS
KQQHKVHKYITSCEMVMAPVHEAVVSLHVSKVWDDISPQFYATFWSLTMYDLAVPHTSYE
REVNKLKVQMKAIDDNQEMPPNKKKKEKERCTALQDKLLEEEKKQMEHVQRVLQRLKLEK
DNWLLAKSTKNETITKFLQLCIFPRCIFSAIDAVYCARFVELVHQQKTPNFSTLLCYDRV
FSDIIYTVASCTENEASRYGRFLCCMLETVTRWHSDRATYEKECGNYPGFLTILRATGFD
GGNKADQLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIVLTKILPWYPKVLNL
GQALERRVHKICQEEKEKRPDLYALAMGYSGQLKSRKSYMIPENEFHHKDPPPRNAVASV
QNGPGGGPSSSSIGSASKSDESSTEETDKSRERSQCGVKAVNKASSATPKGNSSNGNSGS
NSSKAVKEKRPNKDEKARETKERTPKSDKEKEKFKKEEKAKDEKFKTTVPSIESKSTQEK
EREKEPSRERDIAKEMKSKENAKGGEKTPVSGSLKSPVPRSDVAEPEREQKRRKIDTHPS
PSHSSTVKDSLIELKESSAKLYLNHTPPPLSKSKEREMDKKDLDKSRERSREREKKDEKD
RKERKRDHSNNDREVPPDLAKRRKEENGTMGVSKHKSESPCESPYPNEKDKEKNKSKSSG
KEKGGDSFKSEKMDKISSGGKKESRHDKEKIEKKEKRDSSGGKEEKKHHKSSDKHR
NT seq 4671 nt   +upstreamnt  +downstreamnt
atggcggccgcaactgtggtggttcccgtagagtggataaagaactgggagaaatcaggg
agaggcgaatttttgcatttatgccggatcctcagtgaaaataaaagccatgatagttca
acttacagagatctccagcaagctctttatgagttatcataccatgtcattaaaggaaat
ctaaagcatgatcaggcatctaatgttcttaatgacatttttgaatttcgtgaggatatg
ccctccattcttgctgatgtattctgcatattagatattgagacaaattgtttagaagaa
aaaagcaagagagactattttacacaattggtattagcatgtttgtatttagtttcagac
acagttctaaaggaacgcctggatccagaaacattggaatcattagggcttattaaacaa
tcacagcagttcaatcaaaagtcagttaaaatcaagacaaagctcttttataagcagcaa
aaattcaatttgttaagagaagagaatgaaggttatgccaagctgattgctgaattgggg
caagatttatctggaaatattactagtgatttaatcttagaaaatatcaaatctttaata
ggatgctttaatctggatcccaatagagttttggatgtcattttagaagtgtttgaatgc
aggccagaacatgatgacttctttatatctttattagaatcttacatgagtatgtgtgaa
ccgcaaacactgtgtcatattcttgggttcaaattcaagttttaccaggaaccaaatgga
gagactccttcatctttatacagagttgcagcagtccttctacaatttaatcttattgat
ttagatgatctttatgtacatcttcttccagctgataattgcattatggatgaacacaaa
cgagaaattgtagaagctaagcaaattgttagaaaacttacgatggttgtattgtcttct
gaaaaaatcgatgagcgagagaaagaaaaggaaaaagaagaggagaaagtagagaagcct
cctgacaaccaaaaacttggtttgttggaagccttgttgaagattggtgattggcagcat
gcacagaacattatggatcagatgcctccgtactatgcagcttcacataagctaatagcc
cttgctatttgcaagctcattcacataactatagagcctctctaccgaagagttggcgtt
cctaaaggtgctaaaggctcacctgttaatgctttgcaaaataagagagcaccaaaacaa
gcagagagctttgaagatttgaggagagatgtcttcaatatgttctgttaccttggtcct
cacctttctcacgatcccattttatttgcaaaagtggtgcgcataggcaagtcatttatg
aaagagtttcagtctgatggaagcaaacaagaagataaagagaaaacggaagttatcctt
agctgtttacttagcattactgaccaggtactacttccatctctttctttgatggactgc
aatgcttgtatgtctgaggaactatggggaatgtttaaaacatttccctatcagcatagg
tatcgtctgtatggccagtggaagaatgaaacttataacagtcacccacttttagtaaaa
gttaaggcccaaacaatagacagagccaaatatatcatgaagcgtctaaccaaggaaaat
gtgaagccttctggaagacaaattgggaaattgagccacagcaatccaaccattttgttt
gattatatcttatcacaaatacagaagtatgataacttaataacacctgtagtagattca
ctgaaatacctgacttcattgaattatgatgttttggcctattgtatcatcgaagcttta
gctaatccggaaaaggagagaatgaaacatgacgacacaaccatctcaagctggcttcag
agtctggctagtttctgtggtgcagtttttcgtaaatatccaattgatcttgctggtctt
cttcaatatgtggctaatcagctaaaggcaggcaaaagttttgacctgcttatattgaaa
gaagtggtacaaaaaatggcagggaaagaaatcacagaggaaatgacgatggagcaacta
gaggccatgactggtggagagcaactaaaagctgagggtggttattttggccagatcaga
aacactaaaaaatcctcccagagattaaaagatgcactattggaccatgatcttgctctt
cctctctgtttgcttatggctcagcagaggaatggggtaatcttccaggaaggtggagag
aaacatttgaaacttgtgggaaaactctatgatcagtgtcatgataccctggtgcagttt
ggtgggtttttagcatctaatctaagcacagaagattatataaagcgagtgccttcaatt
gatgtgctctgtaacgaatttcatacaccccatgatgcagcatttttcctgtctaggcca
atgtatgcacaccacatttcgtccaagtatgatgaacttaaaaaatcagaaaaaggaagt
aaacagcaacataaagttcacaagtacattacatcgtgtgaaatggtgatggctcctgtc
catgaagcagtggtctccttacatgtttccaaagtctgggatgacatcagccctcaattc
tatgccacattctggtcattgacaatgtatgaccttgcagttccacacaccagctatgaa
cgggaagtcaataaacttaaagtccagatgaaagcaattgatgacaatcaggaaatgcct
ccaaataaaaagaaaaaggagaaggagcgttgtactgcccttcaggacaagcttcttgaa
gaagaaaagaaacagatggaacatgtacagcgagttctacagagactgaaactggagaag
gacaactggcttttagcaaaatctaccaaaaatgagaccatcacaaaatttctacagctg
tgtatatttcctcgatgtattttttcagcaattgatgctgtttactgtgctcgttttgtt
gaattggtacatcaacagaaaactccaaatttttccacacttctttgctatgatcgagtt
ttctctgatataatttacacagttgcaagctgtactgaaaatgaagctagtcgatatggg
cgatttctttgctgcatgttagagactgtgaccaggtggcacagtgatcgcgccacatat
gaaaaggaatgtggaaattatccaggattccttactatattacgagcaactggatttgat
ggtggaaataaagctgatcaattagactatgaaaattttcgacatgttgtgcataaatgg
cattacaaactaaccaaggcatcggtgcattgccttgaaacaggcgaatatactcacatc
aggaatattttgattgtgctaacaaaaatacttccttggtacccaaaagttttgaatctg
ggtcaggctttggaaagaagagtgcataaaatctgccaagaagaaaaagagaagaggcca
gatctatatgcattggctatgggctactctgggcagttgaaaagtagaaagtcatacatg
atacctgaaaatgagtttcatcacaaagacccccctccgaggaatgcagttgccagtgta
caaaatgggcctggtggtgggccttcttcttcgtcgataggaagtgcatccaaatcggac
gaaagcagtactgaggagactgataaatcaagggagagatctcagtgtggtgtgaaagct
gttaataaagcttctagtgccacaccaaaagggaattcaagcaatggaaacagtggctct
aacagcagcaaagctgttaaagaaaagcggccaaataaagatgaaaaagcaagagagacg
aaggaaagaacaccaaagtcagacaaagagaaagaaaaattcaagaaggaagaaaaagct
aaagatgagaaattcaaaaccactgtccccagcatagaatcaaaatcgactcaagaaaag
gaaagagagaaggagccatccagagaaagagatatagcaaaggaaatgaaatcaaaggaa
aatgctaaaggaggagaaaaaacaccagtttctgggtccttgaagtcacctgttccccga
tcagatgttgcagagcctgaaagggaacaaaaacgccgcaaaattgatacccacccttct
ccatcgcattcctcaacagtaaaggacagtctcatcgaactcaaggagtcttcagcaaag
ctctaccttaatcatactcctccaccactgtccaagagtaaggagagagaaatggacaag
aaagatttggacaagtcgagggaaagatccagagaaagagagaaaaaagatgaaaaggac
aggaaagaacggaaaagggatcattcaaacaatgaccgtgaagtgccaccggacttagcc
aagaggcgaaaagaggaaaatggaacaatgggggtttcaaaacacaaaagtgaaagtcca
tgtgagtctccttatccaaatgagaaagacaaggaaaaaaataagtcaaaatcttcaggc
aaagaaaaaggcggcgattcgtttaaatctgaaaagatggataaaatctcctccggtggc
aaaaaggagtccaggcatgataaagaaaagatagaaaagaaagagaaacgggacagttca
ggaggaaaggaagagaagaaacatcataagtcctcggacaagcacagataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (12)   
   RefSeq(pep) (12)   
DNA sequence (12)   
   RefSeq(nuc) (12)   
Protein domain (3)   
   Pfam (3)   
All databases (37)   

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