KEGG T02988: 102962909

Panthera tigris altaica (Amur tiger): 102962909

Entry

102962909         CDS       T02988

Symbol

COL5A3

Name

(RefSeq) collagen type V alpha 3 chain

K19721

collagen type V/XI/XXIV/XXVII, alpha

Organism

ptg Panthera tigris altaica (Amur tiger)

Pathway

ptg04820

Cytoskeleton in muscle cells

ptg04974

Protein digestion and absorption

Brite

KEGG Orthology (KO) [BR:ptg00001]
09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    102962909 (COL5A3)
09150 Organismal Systems
  09154 Digestive system
   04974 Protein digestion and absorption
    102962909 (COL5A3)
09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:ptg00536]
    102962909 (COL5A3)
Glycosaminoglycan binding proteins [BR:ptg00536]
Heparan sulfate / Heparin
  Extracellular matrix molecules
   102962909 (COL5A3)

SSDB

Motif

Pfam:

Collagen COLFI Laminin_G_2 Laminin_G_3

Other DBs

NCBI-GeneID:

102962909

NCBI-ProteinID:

XP_015391793

Position

AA seq 1714 aa
MRTSRACSFSLTHRHRGGLKPPNLSCSHGVLDFFNCLAPRLLSTADPVDVLKALGVRGGQ
AGVSEGPGFCPQRAPEGDRAFRVGKATTLGTPTWELFPDGHFPENFSVLITLRGQPANQS
VLLSIYDEGGARQLGLALGPALGLLGDSFSPLPQQVNLMDGRWHRVAISVDGRMVTLVAD
CEPQPPTLGQGPRFISTAGLTVLGTQDLGEETFEGDIQELLISPDPQAAFQACERYLPGC
DNLDPVATGAPQGEPETPAPRRKGKGKGKKKGRGRKGKGRKKKKNKETLIPSLPPGSVEN
QTSTDIPQTETPASTLPPIPTPLVMTTTVTIGHNVTMLEGPLDPDSGTELRTLETKLAKE
DKEGGGPTIVPVFRAAEQPSQTQFQIFSGAGEKGAKGEPAVIEQGQQFEGPPGAPGPRGV
VGPSGPPGPPGFPGDPGLPGPAGLPGIPGIDGIRGLPGTVIMMPFQFASSSLKGPPVSFQ
QAQAQAVLQQAQLSMKGPPGPVGLTGRPGPVGLPGYPGQKGEMGEMGPQGPRGLQGPLGP
PGREGKMGRSGADGARGLPGDTGPKGDRGFDGLPGLPGEKGQRGDFGHVGHPGPPGEDGE
KGAEGPPGPTGQAGEPGPRGLIGPRGSPGPLGRPGVLGIDGAPGAKGNVGPPGEPGPPGQ
QGNPGSQGLPGPQGPIGTPGEKGPPGNPGIPGIQGSDGPPGHPGHEGPTGEKGAQGPPGS
AGPPGYPGPRGVKGTSGNRGLQGEKGEKGEDGFPGFKGDGGLKGDRGPPGPPGPRGEDGP
EGLKGQEGLAGEEGPPGSAGEKGKLGVPGLPGYPGRPGPKGSTGFPGPLGPLGEKGKRGK
AGQPGLEGERGPPGSRGERGQPGPTGQPGPKGDVGQDGASGIPGEKGLPGLQGPPGFPGP
KGPPGPQGKDGRPGHPGQRGELGFQGQTGPPGPAGVVGPQVRREPTGPPGPPGEQGLPGL
EGREGVKGDLGPPGPLGKEGPPGPRGFPGPQGAPGDPGPIGLKGDKGPLGPVGANGPPGE
RGPVGPAGGMGLPGQSGGQGPVGPAGEKGSPGERGSPGPTGKDGIPGPLGLPGPPGAVGP
SGEDGDKGEVGAPGNKGSKGDKGDAGPPGPTGVRGPVGHPGSPGADGAQGRRGPPGLFGQ
KGDDGVRGFVGVIGPPGLQGLPGPPGEKGEVGDVGSMGPHGAPGPRGPHGPSGSEGPPGL
PGGVGQPGAVGEKGEPGEAGDPGPPGTPGIPGPKGEIGEKGDSGPSGAAGPPGKKGPPGE
DGVKGNVGPTGLPGDLGPPGDPGVSGIDGSPGEKGDPGDVGGPGPPGASGEPGPPGPPGK
RGPSGRMGPEGKEGEKGAKGEPGPDGPPGMTGPVGARGPPGRVGPEGLRGIPGPVGEPGL
LGPPGLMGPPGPLGPSGLPGLKGDAGPKGEKGHIGLIGLIGPPGEAGEKGDQGLPGVQGP
PGPKGEPGPPGPIGSLGPPGSPGVAGPLGQKGSKGSPGSFGPRGDTGPPGPPGPPGPPAE
LHGLRRGGKPSGPAPDSLTPPGSSAGEYWIDPNQGCARDALRVFCNFTAGGETCLYPDKK
FETVKMASWSKEKPGNWYSTFRRGKKFSYVDADGSPVNVVQMTFLKLLSATARQSFTYSC
QNSAAWLDEAAGDYGRSLRFLGANGEEVSFNQTTAATIAVPYDGCRLRKGQTKTLLEFSS
SQVGFLPLWDVAATDFGQTNQKFGFELGPVCFSS

NT seq 5145 nt +upstreamnt +downstreamnt
atgaggacgtcccgcgcctgctccttctctctgacccacagacaccgtggggggctgaag
cccccaaacctgagctgctcacatggagtcctagatttttttaactgccttgcaccccgg
cttctctctacagcagaccctgtggatgtgctgaaggccctgggtgtgcgagggggccag
gctggggtctctgaagggcctggcttctgcccccagagggccccggagggtgaccgggca
ttcagggttggcaaggccaccacacttggcacccctacgtgggagctttttccagatggg
cactttcccgagaacttttccgtgctgatcactctgcggggccagccagccaaccaatct
gtccttctgtccatttatgatgagggtggtgctcggcagctgggcctggctctggggcca
gctctgggtctcctaggtgactccttcagccccctcccccagcaggtcaacctcatggat
ggcaggtggcaccgtgtggcaatcagtgtggatggcaggatggtgactctggtggccgac
tgtgaacctcagccccccacgttgggccaggggcctcgattcattagcacggctggactc
actgtgttgggcacccaggacctcggggaggagacttttgagggagatattcaggagttg
ctgataagtccggatcctcaggctgccttccaggcctgtgagcggtaccttcctggctgt
gacaacctcgaccctgtagccacaggggccccccagggtgagccagaaactccagcccct
cgacgtaaggggaagggaaaagggaagaaaaaagggcgaggtcgtaaggggaagggcagg
aagaagaagaagaacaaggagactttgatcccaagcctacctcctggctccgtggagaac
cagacctccactgacatcccccagacagagacaccagcttcaactttacctccgattccc
acgcctttggtcatgaccaccactgtgactattggccacaatgtcaccatgctagagggg
cccctggaccctgacagtggaacagaactgaggaccctggagactaagttagccaaagaa
gacaaagaaggaggtggccctaccattgtccctgtcttccgggcagcagagcagccgtca
cagactcagttccagattttttctggtgctggagagaagggagcaaaaggggaaccagca
gtgattgaacagggacagcagtttgagggacctccaggagccccaggaccccgaggggta
gtcggcccctcaggccctcccggccccccaggattccctggagaccctggtctaccgggt
cctgctggcctccccggaatccctggcatcgatggcatccggggtctaccaggcactgtg
atcatgatgccgttccagtttgcaagcagctccctcaaaggacccccagtctccttccag
caagcccaggcgcaggcagtcctgcaacaggctcagctgtctatgaaaggtcctcctggc
ccggtggggctcactgggcgcccaggccctgtgggtctccctgggtatcctggtcagaaa
ggagagatgggagaaatggggccacagggtccccgaggccttcagggacctcttgggccc
cctggccgggagggaaagatgggccgctctggagcagatggggcccggggcctcccaggg
gacacaggacctaagggtgatcggggctttgacggcctgccagggctgcctggtgagaag
ggccaaaggggtgactttggccatgtggggcatcctggccccccaggagaggatggtgag
aagggagcagagggacctccggggcccacaggccaggctggggaaccgggcccccgagga
ctgatcggccctagaggctcccctggtcccctgggacgcccgggtgtacttgggattgat
ggtgctccgggagccaagggaaatgtgggtcctccgggagaaccaggccctccaggacag
cagggaaatcctggatcccagggactccctggcccccaggggcccattggcactcctggg
gagaagggcccccctggaaacccaggtattccaggcattcaaggatctgatggccctccg
ggtcacccaggccatgagggccccacaggagagaaaggggcccagggtccaccagggtca
gcaggacccccgggctatcctggacctcggggtgtgaagggtacctctggcaaccgtggc
ctccagggggagaaaggagagaagggagaggatggcttcccaggcttcaagggcgatggg
gggcttaaaggagatcggggaccccccgggccccccggtcctcggggagaagatggtcct
gaagggctgaaggggcaggaggggctggccggcgaggaggggcccccaggctcagctggg
gagaagggcaagctgggggtgccaggtctcccaggttacccaggacgtccgggccctaag
ggatctactggctttcccgggccgctgggacccttaggagaaaaagggaagcggggtaaa
gcggggcagccgggcctggaaggagagcgggggccaccaggctcccgtggagagaggggg
caaccgggtcccaccgggcaaccgggccccaagggtgatgtgggccaggacggggcctct
gggatccctggggaaaagggcctcccaggtctgcagggccctcctggattccccgggcca
aagggtccccctggtccccaggggaaggacgggcgtcccgggcaccctggacagagagga
gaactgggcttccaaggtcagacaggcccacctggaccagctggtgtcgtgggtcctcag
gtcagaagggagcccacaggtcctcctggacctccgggtgaacaaggtcttccgggcctg
gaaggcagagagggtgtcaagggagacctggggccacccgggccccttgggaaggaagga
ccgcctggacccaggggcttccccggcccccaaggagcccctggggaccccggacctatt
ggtttaaagggtgacaaaggccccctgggccctgttggagccaatggccctcctggggag
cggggtcctgtgggcccggcaggaggcatggggcttcctggccaaagtggaggccaaggc
cctgttggccctgcaggcgagaaggggtccccgggcgaacgtggctcccccggccccacg
ggcaaagatgggatcccagggcccctggggcttcctggaccgccgggagctgttgggcct
tctggcgaggatggggacaagggggaagtgggtgcccctggcaacaaagggagcaaaggc
gataaaggggatgcgggcccgcctggaccaacaggggtacggggtcctgtgggacaccca
ggctccccgggagcagatggggctcagggacgcaggggaccaccaggcctctttgggcag
aaaggagatgatggagtgagaggcttcgttggggtgattggcccccctggcctgcaggga
ctgccgggccctcctggagagaaaggggaggtcggagatgtagggtccatgggtccccat
ggagctccaggccctaggggtccccatggccccagtggatcggagggccctccagggctg
cctgggggagttggtcagccgggcgctgtgggcgagaagggtgagccaggggaggctgga
gacccaggacccccaggaaccccaggcatccctgggcccaagggagaaattggtgaaaag
ggggactcaggtccatctggggctgctggacccccaggcaagaaaggcccccctggagag
gatggagtcaaagggaacgtgggccccactgggctcccaggagatctaggcccccccgga
gacccaggagtttcgggtatagacggctccccaggagagaagggagaccctggtgatgtt
gggggaccgggtccgcctggagcttctggggagcctggcccccctgggccccccggcaaa
aggggtccttcaggccgcatgggtccagaaggcaaagaaggggagaaaggggccaagggg
gagccaggtcccgacgggcccccagggatgacgggcccagtgggggctcgagggccccct
ggacgtgtggggcctgagggtcttcgggggatccccggccctgtgggtgaaccaggcctc
ctgggacctcctggactgatgggccctcctggacccctggggccctctggccttccagga
ttgaagggagatgctggccccaagggggaaaaaggtcacattggattaattggcctcatc
ggcccccctggggaagctggtgagaaaggggatcaggggttgccaggcgtgcagggcccc
cccggccccaagggagaacccggtccccccggtcccatcggctctctgggcccccctggg
tccccaggtgtggcgggtcctctgggacagaagggctcaaaaggttccccgggatccttt
ggtccccgtggcgacactggcccccctggcccccctggccctccgggtcccccggccgag
ctgcacgggctacgccggggcgggaagccgtcgggccccgcccccgactcactgacccca
cctggctcttcggcaggggaatactggattgaccccaaccagggctgtgcgcgggacgcg
ctcagggttttctgcaacttcacggctggaggagagacctgcctctatcccgacaagaag
tttgagaccgtgaaaatggcctcctggtccaaggaaaagccgggaaactggtacagcaca
ttccgtcgagggaagaagttctcctacgtggacgctgacgggtctccggtgaacgtggtg
cagatgaccttcctgaagttgctgagtgccacagcccgccagagcttcacctactcctgc
cagaactctgccgcctggctggacgaagctgcaggcgactacggccgctccctccgcttc
ctcggggccaacggggaagaggtgtccttcaaccagacgacagcagccaccatcgctgtc
ccctacgatggctgccggctccgcaagggacagacgaagaccctcttggagttcagctct
tcccaagtggggtttctgcctctgtgggatgtggcggctactgacttcggccagacgaac
cagaagtttgggtttgaactgggccctgtctgctttagcagctga

All links

Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

Download RDF

DBGET integrated database retrieval system