KEGG   Phaeodactylum tricornutum: PHATRDRAFT_12309
Entry
PHATRDRAFT_12309  CDS       T01075                                 
Name
(RefSeq) hypothetical protein
  KO
K12873  bud site selection protein 31
Organism
pti  Phaeodactylum tricornutum
Pathway
pti03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pti00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PHATRDRAFT_12309
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pti03041]
    PHATRDRAFT_12309
Spliceosome [BR:pti03041]
 Complex B
  Other components
   Prp19-related factors
    PHATRDRAFT_12309
 Complex C
    PHATRDRAFT_12309
SSDB
Motif
Pfam: BUD31
Other DBs
NCBI-GeneID: 7200922
NCBI-ProteinID: XP_002180006
JGI: 12309
UniProt: B7FYN8
Position
8:274919..275320
AA seq 134 aa
MPLPTKWNQKRRTPPPGFEDVEPVLEALENELRDKVKETNAKQRKQEAMWPVHQINWQKS
RYIYDLYYTHERISKEVYQYCIQQKLVDPALIAKWKKPGYERLCSTYVISPVNYKFGTTS
LCRVPWKDRSEDQK
NT seq 402 nt   +upstreamnt  +downstreamnt
atgccgttacccaccaaatggaatcagaaacggcggactccgccacccggttttgaggac
gtcgagcctgtcctcgaagcgttggaaaatgaattgcgcgacaaggtcaaggaaaccaac
gcgaaacaacgcaagcaggaggctatgtggccggtacaccagattaactggcaaaagtct
cggtacatttacgacttgtattacacgcatgagcgaatttccaaagaagtttatcagtac
tgcattcagcaaaaattggttgatccagccctgattgccaagtggaaaaagccaggatac
gagcgactttgttcaacctacgtcattagtccagttaattacaaatttgggacgacaagc
ctatgtcgtgtcccatggaaggatagatcagaagaccaaaag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (17)   

Download RDF
DBGET integrated database retrieval system