KEGG   Phaeodactylum tricornutum: PHATRDRAFT_29212
Entry
PHATRDRAFT_29212  CDS       T01075                                 
Name
(RefSeq) hypothetical protein
  KO
K13137  serine-threonine kinase receptor-associated protein
Organism
pti  Phaeodactylum tricornutum
Brite
KEGG Orthology (KO) [BR:pti00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pti03041]
    PHATRDRAFT_29212
Spliceosome [BR:pti03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   SMN complex factors
    PHATRDRAFT_29212
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 NBCH_WD40 RMC1_N WD40_like PQQ_2
Other DBs
NCBI-GeneID: 7202997
NCBI-ProteinID: XP_002182271
JGI: 29212
UniProt: B7G5M1
Position
15:652887..654737
AA seq 317 aa
MANDSKNTRKIPIVCPGHTRPLAELQFCYIAPEQRTFLVSACHDRLPMLRDGTSGDWIGT
FVGHKGAVWSCRMDPSGSLAATASGDFSVHVWDAITGKDLFQLPHKHIVKTCDFSPNSKY
LATGGHEGILRIYDLTQPEQAPITIPQDPSKKITITKCNWLSEDLLIVGCGDGKIRFWQP
LAQGGPATVPVHTMSTEGTSEIRDMEVSRTTAGQDVLTVAAGERVYFFDLQTRTCLKSYK
MPIHFREEGGASLHPSGNKFVAGGSDLWVRVFDYQTGEELELNKGHHGPIRCIRYSPTGE
SYATGSEDGTIRLWKTD
NT seq 954 nt   +upstreamnt  +downstreamnt
atggcgaacgatagcaaaaacactcgcaagatccccatcgtatgtcccgggcatactcga
ccgcttgcggaactccagttttgttacattgctccggaacaacgaacgtttctggtttcg
gcctgtcacgatcggctgcccatgttgcgagacggcacgagcggggactggatcgggacg
tttgtgggtcacaaaggtgccgtttggagttgccggatggatccgtcgggtagtttggct
gcgacggcaagcggcgactttagcgtgcacgtgtgggacgctattacgggaaaggatctg
tttcaactgccacacaagcacattgtcaagacgtgcgacttttcgcccaactcgaaatat
ttggcaaccgggggacacgaaggcattctacgaatttacgatttgacacaaccggagcaa
gctccgattaccatcccgcaagacccgtctaaaaagattacgattaccaagtgcaactgg
ttgtcggaggacttgctcatcgtgggctgcggggatgggaaaattcggttctggcagcct
ctggcgcagggcggtccggcaacggttcccgtacacaccatgtccaccgaaggcaccagc
gaaatccgagacatggaggtctcacggactacagccggtcaagacgttttaacggtagcc
gctggggagcgcgtttatttctttgacctgcaaacacggacttgcctcaagtcctacaaa
atgcccattcactttcgggaggaaggcggagcttcgttacatccgtccgggaacaagttc
gtggccggtggaagcgatttgtgggttcgtgtctttgattatcaaactggagaagaactc
gaactcaacaagggacaccacggtcccattcgctgtatccgttacagcccgaccggcgag
agctacgccactggctctgaagacggtacaatccgtctctggaagacagattaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (111)   
   KEGG ORTHOLOGY (1)   
   RefGene (106)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (123)   

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