KEGG   Phaeodactylum tricornutum: PHATRDRAFT_35556
Entry
PHATRDRAFT_35556  CDS       T01075                                 
Name
(RefSeq) hypothetical protein
  KO
K09291  nucleoprotein TPR
Organism
pti  Phaeodactylum tricornutum
Pathway
pti03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:pti00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    PHATRDRAFT_35556
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pti03019]
    PHATRDRAFT_35556
Messenger RNA biogenesis [BR:pti03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     PHATRDRAFT_35556
SSDB
Motif
Pfam: TPR_MLP1_2
Other DBs
NCBI-GeneID: 7200910
NCBI-ProteinID: XP_002179992
JGI: 35556
UniProt: B7FZR5
Position
8:215786..221848
AA seq 1902 aa
MSSPSDETIAGPPSSPTTEDAGTQARKASAALTSKVMLEELERQYMQIKGERDDLQQELT
AAEEKFKTLNESLTSNQALEVENAARQHELRVAQERVKALEEEQTATKERTDRAQAESDR
LREEIARLAGSNRELSENIATFEVQSKLSESQAIPLFHEKQRLQTELDSLQAHANWLEQE
LTAKSQDYQKLQRESRDRSIQLQLQLDQTINEKEAFEARLDELHKMERRLQDKVEELSHD
LLTGKQAMTDLQESTEIEIREERRLVQLQKTHLDRWEHRYNDVVRENESLKKAATEAMET
SRSELLQTSEALENKYKDLLREQAAEYEEKLKSNRLEAGPVRLALPAPPAAVATDYEDDV
PLNLTDLYTRLEETKATLRRETARADRAELLNERIQKDIAAKAPLLNRQREEYDFALDQI
QNYQRRLEQALNEVDNAREDSKETRRDANRLQKLLSERTSESKELAKQVQALLVTRAGGQ
VGEEIPTSIVEIQNQNQRLLAEHRRLTETVRELESKLESDTLKAKLDAVEAELADLREDR
QRQETAVERIVQQRDLYRAILSKQDANVLGSESEQLSAMEIAKQQSERYKALDQKSKTLA
SDLAAARGEIDRMGRERESMVERLARYEAHSAEMKAAVDTLERELLSARGDAARSNSESL
YHRERAERVEESLQRARDEISMIGSSKAELQRINTDLQQRVDIVRSESSRVATEVRQAEM
KARLAETQVETAKASESRMAEEVNQLRGEVSRQGSIIESIRRIEASLSAKSGSEREVLKS
ELEKLSQVHKSEQTSFNTKIENLNARIQEMDSRVVAANDSKDKFQSELSSVKDELNAVTA
ERQELNLKARRLEAQLRAAKKKLGEGDDLDDVEVALQARIEHLTNQLEETKSELANSKKQ
ADTYQLISKNAESALAELSQATETMKATNESEVLELNGRLEKLQKENASKQEIVLDLTKD
LLSQRGEQEKVESILKSEIESLKSEMKTREQDSESSAAGTAALKLDLDAMRTEVATAQGN
YERELQLHSQARTALREAREQAQEETRLRHIAEEKTDASAREFDQQKNVWEQEKLSANEN
AKMIEESLKEAREQNRVLHMQLESLGAMVEESQMSRAVAASEIPEPGNSSEQMNLQKMLS
ELREILKFVRSENEILQTQLDTAKRAADRERTTFQVVKRSLDEARAELKSLQNQDIMDKD
LPGNNSAEQLRDAVEQLTLLRDSNKLLRDDADKLQSNLTATQNDLNALKSSRKPAEKVQR
ELEARIASAEAEKESLNRDLAAWKSRVESLLSKFNQIDPEEYEKVLRQVEELTKEKESLT
AWKKTTEAENTRIREICRNLKKHISELKKTIEEQKKDIDKLTTEKATLTTKSTEGTSAAK
ERDELKGKLSQAEKDTASTKTELDGANHQNEILRERMRQMVKTSNELRKKERELVGQLAE
AKSATQTDSIQDKLGKPSENASEKRTLASSKIGISTPTFSATTPESTQRTAGLVDVRAPQ
ILPTIPTNGFRFGPSTKPKPKSPMAVSEDVLQAKSEEKIETRGASELKEPTSVFSEKAPE
FVPHSQMSTKTETNISSTSGSSPLQSGGDVADAKQRSSGELATTTHATPSESQELSMKKE
KLLEKKRLLADAKKRKIQAEAEARKTDTDGLQQVAKKPKTEDTEKESRLIGAEVGDRTLT
AGTMSEQETSNSAEVLLEADKTESELVEVENLDNEEPSKSEIAENETEPAFKPSCFGSGS
TATTSPFTKSNPATPFGRSDAFGQSATVLPGAPTTFGVTSSTVQSSSGFGEAFLSQMKPP
GGSATPPSFSFGSSEIPGQQFQASASVFGSFGGKSTLGSLAGSKEPSMAAFPFASQPAVQ
ENKEQNDDAKDATELEQTEEDVHWARLPGSRKPHFQKPPDLE
NT seq 5709 nt   +upstreamnt  +downstreamnt
atgtcatcgccgtcggatgagacaatagcgggaccgccatcgtctccgacaaccgaagat
gccggaacgcaggctcggaaagcctcggccgccctgacgtcgaaagtaatgctggaagag
ttagaacgtcagtacatgcagattaaaggtgaacgcgatgatttgcagcaagagttaacc
gcggcggaggaaaagttcaagacgctcaacgagtcgttgacttccaaccaagcactcgag
gtggagaatgccgcgcggcaacacgaattgcgtgtggcgcaagaacgcgtaaaagcattg
gaagaagaacaaacagctacgaaagagcgcaccgatcgggctcaagccgaatcggatcgt
ctccgagaagaaatcgctcgtttggccggatcgaacagggaactttccgagaatattgca
acgtttgaagtccagagcaagctcagtgagtcccaggcaattcccctatttcacgaaaag
cagcgtctccagacggaacttgacagcttgcaagcccacgccaattggctggaacaagag
ctaacggccaagtcacaggattaccaaaagctgcagcgagagtcacgtgatcgttctatt
caacttcagcttcaactggaccaaacaattaacgaaaaagaagctttcgaagcccgtttg
gatgaattgcacaaaatggagcggcgtttgcaggacaaagtcgaggagctttcccacgac
ttgttgacggggaagcaagccatgacggatctacaggaatctacagagatcgaaattcga
gaggaacggcgtcttgtacagctccaaaagactcatttggatcgctgggaacatcgatac
aatgacgtcgtccgtgaaaacgagagcctcaaaaaggctgccacggaagccatggagaca
tcgcgttcagaacttctccagaccagcgaagcactggaaaacaagtacaaagatttgctg
agagagcaagcggccgagtacgaagaaaagcttaagtcgaaccgtttggaagccggtcca
gttcgcctggctctgcctgcacccccggctgctgtggcgaccgactacgaagatgatgtt
ccactcaatcttaccgacttatacacacgtttagaagagaccaaggctaccctgcgtcgc
gaaacagctcgggccgatcgtgccgagctcttgaatgagcgcattcagaaggacattgct
gctaaggcacctttgttgaaccggcaacgggaagaatacgactttgccctggaccaaatt
cagaattatcagcgccgcttggaacaagctttaaatgaagttgataatgcacgcgaagat
agtaaagagacgcgccgggacgcaaatcggctacagaaactgttgtcggagaggacttcc
gagtccaaggagttggcaaaacaagttcaggcactattggtaactcgggcaggcgggcag
gtgggagaagaaattccgacttcgattgtcgagattcagaatcaaaaccagcgattactc
gcggagcaccgtcgactaactgaaacagtcagagagctggaaagcaagcttgagtcggat
actctgaaggcaaaactggatgcagtggaagcggagctagcggatttgcgcgaagaccgt
caacgtcaagagactgccgtggagcgtatagttcaacagagagatttgtatcgagctatt
ttgagcaaacaggatgcaaacgtgcttggctcagagtccgagcagctttcggcgatggag
attgccaaacagcagtcggagcgatacaaggctttggatcagaaaagcaagaccttggca
tctgatctggctgctgccaggggtgaaatcgatcgcatgggccgcgagagagaatctatg
gttgagcggttggcccgttacgaagcccattccgccgaaatgaaagccgcagttgacaca
ttggaacgcgagctgttgagtgcgcgtggtgacgcagcacgaagcaattccgagtcactc
tatcacagagagagagctgagcgtgtggaggagtcgctgcagcgtgcgcgcgatgaaatc
tcgatgattggaagttcgaaagctgaacttcaacgcatcaacactgatctacagcagaga
gttgatattgttcgctctgaaagttctcgagttgccacggaagtacgacaggctgagatg
aaggctcggttagcggagacacaagtagagacggcaaaagcaagtgaatcgcgaatggcg
gaagaggtcaaccagctacgtggggaagtttcaaggcaaggatccataatagagtcaatc
agaagaatcgaagcttctctttctgcaaagagtggtagcgaacgagaggttctcaagtct
gaattggagaaactttctcaggtccacaagtcggagcaaacaagctttaatacgaagatc
gaaaatctcaacgcacgaattcaagagatggactcgcgtgttgttgcagctaatgattca
aaggacaagtttcaatcagagttatctagcgtaaaggatgagctgaatgctgtcacagcg
gagaggcaagagctcaatttgaaggcacgccgtctggaagctcaacttcgtgccgcaaag
aagaagcttggggaaggagatgacctagacgacgttgaggtagctctacaagcccgcatt
gaacatctcaccaaccaactggaggagacaaagagtgaactcgccaattcaaagaaacag
gctgacacataccagctaatatcgaagaatgcggagtcggctctcgccgaattgagtcaa
gctacggagactatgaaggctacgaacgagtcagaagtgttggaactcaacggaagacta
gaaaaactccaaaaggaaaacgcatcaaaacaagagattgttctcgatttgaccaaggat
ttgttgagtcagaggggggaacaagagaaggtcgaatctatattgaaatctgaaattgag
agtctgaaaagtgagatgaagacaagggaacaggattctgagtcttcagcagctgggacg
gccgctttgaaactcgacttagatgctatgcgcaccgaggttgccacggcccaaggcaac
tacgagcgagagctccaactgcattcgcaggcacgcactgctttgcgtgaagcacgagag
caggctcaggaggagacacgactacgacatattgctgaggaaaaaacggacgcttctgcg
agggagttcgatcagcagaagaacgtttgggaacaggaaaagttatctgcgaatgaaaat
gcaaagatgatagaagaaagtctaaaggaagcccgtgagcaaaatagagtccttcacatg
caactagagagtttgggtgcaatggtagaagagagtcaaatgtcacgtgctgtggctgcc
agcgagatcccagagcccggaaactcatcggagcaaatgaatttgcagaaaatgttgtca
gagctgcgagaaattctcaagtttgtaaggtcagagaacgaaattcttcagactcaactc
gacacggcaaaacgggctgctgatcgggaacgaacgacttttcaggttgtcaaacgcagc
ttggacgaggcaagagctgaacttaaatcgcttcaaaatcaagacatcatggataaagac
ctccctggcaataattcagccgagcagctgagggatgcggtggaacaacttactttgtta
agggatagcaataagcttttgcgagatgatgcagataagctgcagtctaatttgaccgca
acacagaatgatctcaacgcgttgaagtcatcaaggaagcctgctgagaaagttcaacgc
gagctcgaagcccgcattgcgtcagctgaagccgagaaagagagtttgaatcgcgactta
gctgcatggaagtcaagagttgaaagtctcctttccaaattcaatcagattgatccggaa
gagtatgagaaggttctaagacaagtcgaagaattgacgaaggagaaggagtctctgact
gcatggaagaagacaacagaagcggaaaacacacgaatcagagagatatgccgtaatctc
aagaagcatatcagcgaattgaagaaaacgatagaggaacagaaaaaagatatagataag
ctcacgacggaaaaggctaccctcacaaccaagtctacagaaggaacttcagctgcgaag
gagcgagatgagcttaagggaaaactgtcccaggccgagaaagacacagcttccacgaag
acggagttggatggcgcaaaccatcaaaatgagatcttgagagagaggatgcgccaaatg
gtaaagacgagcaatgagctgcggaagaaagagagggagctggtaggacagctcgccgaa
gcaaaatctgcaacccaaacagactccattcaagacaaattagggaaaccgtctgaaaat
gcttcggaaaaacgtacgttggcgtcttcgaagataggcatttcgacgcctaccttctct
gcaacaacaccagagtcgactcagaggaccgcaggtttggtggatgtaagagcacctcag
attcttccgactattccgactaatggatttaggtttggacctagtaccaagccgaaaccg
aagtctccgatggctgtgtccgaagacgtactccaggcaaaatcggaggaaaagatcgaa
acacggggagcttccgaactaaaagagccgacttccgtttttagcgagaaagccccagag
tttgtgccacactcgcaaatgtcaacaaaaacggagacaaatatttcatctacgagcgga
agctcacctctacaaagcggtggtgacgtagccgacgcaaaacaacgaagctcaggagag
ctggctacgacgacgcatgctacaccgagtgagagtcaagaattatcgatgaaaaaagaa
aagcttttagagaagaaacgactactggcagacgctaagaaacgaaaaatccaggcagaa
gcggaggcaagaaagaccgacactgacggactgcaacaggtagcaaaaaagccaaagacc
gaagacactgagaaagaatcgagactgattggagcagaagtgggagaccgcactctgacg
gctggtacaatgagcgagcaagagaccagtaattcagcagaagttttgctagaagcagac
aaaaccgagtcggaacttgttgaagttgagaatctcgacaacgaagaaccctcgaaaagc
gaaatagctgaaaatgagaccgaaccagcatttaagccttcatgttttggaagcggatcg
actgctacgacaagcccatttacgaagagcaatcctgccacgcctttcggccgatcggac
gcttttggtcaatcggcaaccgtcctacccggtgccccaactacattcggggtcacgtca
tccaccgttcagtcttcatctggttttggggaggcatttttgagccaaatgaagcctcca
ggaggttctgctacaccgcccagcttttcctttggatcttccgagattcccggccagcaa
ttccaggcgtcagcttctgtattcggttctttcggcggcaaatcaacgcttgggagtctt
gccggtagcaaagaaccgtcaatggcagcttttccattcgctagccaaccagctgtacaa
gaaaacaaggaacagaacgatgacgccaaggatgcgaccgaattagagcaaacggaagag
gacgttcattgggctcgcctgcctggctctcgaaagccccatttccaaaagcctccagac
ctcgaatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (160)   
   KEGG ORTHOLOGY (1)   
   RefGene (155)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (168)   

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