KEGG   Phaeodactylum tricornutum: PHATRDRAFT_44955
Entry
PHATRDRAFT_44955  CDS       T01075                                 
Symbol
HDS
Name
(RefSeq) 1-hydroxy-2-methyl-2-(E)-butenyl-4-diphosphate synthase
  KO
K03526  (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
Organism
pti  Phaeodactylum tricornutum
Pathway
pti00900  Terpenoid backbone biosynthesis
pti01100  Metabolic pathways
pti01110  Biosynthesis of secondary metabolites
Module
pti_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:pti00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00900 Terpenoid backbone biosynthesis
    PHATRDRAFT_44955 (HDS)
Enzymes [BR:pti01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.7  With an iron-sulfur protein as acceptor
    1.17.7.1  (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (ferredoxin)
     PHATRDRAFT_44955 (HDS)
    1.17.7.3  (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (flavodoxin)
     PHATRDRAFT_44955 (HDS)
SSDB
Motif
Pfam: GcpE zf-RING_7 CARME
Other DBs
NCBI-GeneID: 7199630
NCBI-ProteinID: XP_002179061
JGI: 44955
UniProt: B7FV10
Position
5:complement(765110..767756)
AA seq 757 aa
MKFLGLTAIMLTGLATSPVQAFVPRMASFGRLQTTASMSSTKEPLTVQDVLWTPAIKSGK
RDEIYGPIQKYCEDLYEVTRRKTRTVNCGPIKFGSDHPIVRQTMATTNTADVEATMDQVM
RCADKGFDLVRVTVQGKREANACAKIREGLFKKGYDIPLCADMHFQPVVALLVADAVEKI
RINPGNFADGRKDFNEKVYETEEDYYAERGYLVEALQPLVEKCKDLDRCMRIGTNHGSLS
SRVLSFYGDTPRGMVESAIEFADICRSLDYHNFVFSMKASNPLVMVQSYRLLAAEQYRLD
WDYPLHLGVTEAGEGEDGRMKSAIGIGTLLADGLGDTVRVSLTEDPEFEYDPCNRLAEIA
EGRLAANNAEAKARQAAVQTYKDTRDITTFARRQGALPAKDEGDAVDCSGFLNTAGSVIS
PVTPEMLKGSSAQYLYQDLGCKTAVGMPFKDVATTDSIFMRTVPPSSDTESRTALRRLIE
VNMGVVVPAEVLEKDPLPNAVALMDLTDAIAKGGKLPEGAIRLAVTIDGSEDDETIAKVK
DLQPAFAFLKPKSELSHLHSARRVFELFKSNDIETAVIHHFESNTNDANELALQVGTKIG
SLLTDGNGDGIMIEQVGEEKPFSVDFLRRTSFSLLQGSRMRNTKTEFVSCPSCGRTLFDL
QETTAGIQEATGHLPGVTVAVMGCIVNGPGEMADADFGYVGTLPGKVDLYYGKEVVRKSV
PNAEAVDALIDLIKEYGMWKDKEEAEEDTEEVAVAVA
NT seq 2274 nt   +upstreamnt  +downstreamnt
atgaagttcctgggtcttacagcgataatgctgacgggcttggcgacctctcctgtgcaa
gcttttgttcctcgtatggcatcctttggtcgactccaaacgaccgcttccatgtcctcc
acgaaagaacccttgacggtgcaagatgttctttggactcccgctatcaagtccggcaaa
cgggacgagatttacggtcccatccaaaagtactgcgaggacttgtacgaggtgacccgc
cgcaagactcgtaccgtaaactgtggcccgatcaaatttggttcggaccatccaattgtc
cgccaaaccatggcgacgaccaatactgctgatgttgaagcgaccatggaccaagtcatg
cggtgtgcggataaaggctttgatctggtacgcgttacggtgcagggaaaacgggaagcc
aacgcgtgtgccaagattcgcgaaggattgttcaaaaaaggatacgacatcccgctctgc
gccgatatgcactttcaacccgtcgtcgccttgctagtagcggatgcggtggaaaaaatt
cggattaatccgggaaactttgcggacgggcggaaggatttcaacgaaaaggtctacgaa
acagaagaagactattacgcggaacgtggctacttggtcgaagccttacagcctttggta
gaaaagtgcaaagatttggatcgctgtatgcgtattggtactaatcatggatctttgtca
tcccgcgttctttccttttacggtgatacgccccgtggtatggtggaatcagccatcgaa
tttgccgacatttgccgcagcttggattaccacaactttgtgttctccatgaaggctagc
aacccactcgtcatggtacagagttaccgtttgctagcggccgagcagtaccgcctggac
tgggactaccccctacatttgggtgtgaccgaagccggtgagggtgaagacggccgcatg
aaatcggcgattggtatcggaactttgctcgcggacggcctcggtgacacggttcgcgta
tctctgacggaagatcccgaatttgaatacgacccttgcaatcgattggcggagatagcc
gaaggtcggttggccgcgaacaacgccgaagccaaggcccgacaggcggccgtccagact
tacaaggatactcgtgatatcaccacgtttgcccggcgacagggtgccttgccagcgaaa
gacgagggcgacgccgttgattgcagcggatttcttaatacggccggttcggttatttct
ccggtgacgccagaaatgctcaaaggaagcagcgcgcagtatttgtaccaagacctggga
tgcaagacggccgtcggtatgcccttcaaggatgtggcaacgacagattcgatctttatg
cgtactgtccccccgagttcggatacggagtcccgaacggctttgcgtcgcttgatagag
gtgaacatgggtgtggttgttccggcggaagtgctcgaaaaggaccctttgcccaacgcg
gtggccttgatggacctgacggacgcgattgccaagggtggaaagctcccggaaggtgct
attcgattggctgtcaccattgacggatcagaagacgacgagacaatcgccaaggtcaaa
gacttgcagccggcgtttgcattcctcaagccgaaatcggaattgtcccatctacactcg
gctcgccgtgtgtttgaacttttcaaaagcaatgatatcgaaacagcggttatacaccat
ttcgaatccaacacgaatgacgccaacgaactcgccctgcaggtcggaactaaaattggt
tcgctcttgacggacggcaacggtgacggtatcatgattgaacaggttggggaggagaag
ccgttttcggtagattttttgcgacgaacgtcattcagtttgctacagggaagtcgcatg
cgcaacacgaagacagaatttgtttcttgtccgtcctgcggccgaacgttgttcgactta
caagaaacgacggctggtatccaagaggcaacgggacacttgcctggtgtgacggtggcc
gtcatgggatgcatcgtgaacggacctggcgaaatggcggatgctgactttggatacgtg
ggcacgctccccggcaaagtggacttgtactacggtaaggaagtggttcgcaaaagcgtt
cccaacgccgaagccgtggatgccttgattgaccttatcaaggaatacggcatgtggaag
gataaggaagaagcagaagaggatacggaagaagtcgccgtcgccgttgcgtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (4)   
   KEGG PATHWAY (3)   
   KEGG MODULE (1)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (183)   
   KEGG ORTHOLOGY (1)   
   RefGene (178)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (207)   

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