KEGG   Phaeodactylum tricornutum: PHATRDRAFT_49339
Entry
PHATRDRAFT_49339  CDS       T01075                                 
Symbol
PYC2
Name
(RefSeq) precursor of carboxylase pyruvate carboxylase
  KO
K01958  pyruvate carboxylase [EC:6.4.1.1]
Organism
pti  Phaeodactylum tricornutum
Pathway
pti00020  Citrate cycle (TCA cycle)
pti00620  Pyruvate metabolism
pti01100  Metabolic pathways
pti01200  Carbon metabolism
pti01230  Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:pti00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    PHATRDRAFT_49339 (PYC2)
   00620 Pyruvate metabolism
    PHATRDRAFT_49339 (PYC2)
Enzymes [BR:pti01000]
 6. Ligases
  6.4  Forming carbon-carbon bonds
   6.4.1  Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
    6.4.1.1  pyruvate carboxylase
     PHATRDRAFT_49339 (PYC2)
SSDB
Motif
Pfam: CPSase_L_D2 PYC_OADA Biotin_carb_N Biotin_carb_C HMGL-like Biotin_lipoyl Dala_Dala_lig_C ATP-grasp Biotin_lipoyl_2 ATP-grasp_3 HlyD_3 ATPgrasp_Ter RnfC_N
Other DBs
NCBI-GeneID: 7195500
NCBI-ProteinID: XP_002183906
JGI: 49339
UniProt: B7GA98
Position
21:627913..631798
AA seq 1264 aa
MRRVAVFVLVLSMPSMAAAFAPRRSWTTATTPAGIETAATMARRSLLSSLLRVSTGTDSE
KDTNASTDSIQTDSVVTEASARNSKLVRNVPPFQRILAANRAEIAVRIMRAATELNAGTV
AMYTHEDRYSQHRWGADQSFLLDKKNPTSSPISAYLDIPQIIRLALDAGVDAIHPGYGFL
SESPEFAQACADASITFVGPTVENLQRFSDKTSARQAAIEADVPVVPGSDGALETEADVT
AFVEANGLPVILKAAMGGGGKGMRVVRRMEDLIPFFQAASSEALASFGDGAVFVERFVER
PRHIEVQIIGDGTGNVVHLWERDCSIQRRHQKVIEMAPAWTLPDELRAQLHEYAVRLTSQ
AKYKNAGTVEFLIDAELRPYFIEVNPRIQVEHTVTEEVTGIDLVQAQIKIAAGATLEEVG
LVQANIQPRGVAIQCRVTTENPERDFAPDTGTVTLYRHSAGKGVRMDGIGYSGMTITPYF
DSMIVKYTALGANFPETVARMKRVLQECRIRGVKTNVGFLLNVLSHPEFETGIVTTSFID
ENPQLKQTSMSMYDFASEEQADPRKTFATERLVRYLANLAVNGQPPELGADSQKLTRTTA
IADIPAPEIRSEGNAAVPSDESPNQPGWRHLLLEQGPKAYAKAVREHQGLLITDTTWRDA
HQSLLATRMRTQELIKSADYTNMALANAFSLEMWGGATFDVAMRFLRECPWERLEALREK
VPNVPFQMLLRGANAVGYTNYADNVVHKFCKQAHDSGVDVFRVFDSLNYIENLQLGVDAA
GEAGGFVEGAMSYTGDVADPTKGKYSLEYYMNLASELVDMGVHSLAIKDMAGLLTPKAST
LLVSALREAHPDIPIHVHTHDTAGSGVASMLAAAQAGADIVDSSMDAFSGMTSQPSLGAL
VANLAGTERDTGIQLSNLPPLNSYWEDVRSLYAPFESGQLSGSSDVYFHEIPGGQYTNLL
FQSKQLGLSDRWTEIKTKYAEANIILGDIPKVTPSSKVVGDLAQFLVSQNLEANEVLEKA
DTLAFPDSVINYLKGDIGVPPGGFPEPLRNKVLQSRNLEPIEGRPGKFLPDYNFDKEREL
LEKRFGKANIDEKDCLSYALYPDVFTEWKDFQALYGDVGKLPTRLFLNPMQVGDEVEIEI
AKGQTLIVELVSIQDVKEDGTRTVIFEVNGEPWYMPVTDQNLLGDSAVREKAVAPGQVGA
SMPGVVVGLKVKAGDTVQEGETVATLSAMKMETSIPATASGVIKRVLVNVGDKVNGDDLI
LEIE
NT seq 3795 nt   +upstreamnt  +downstreamnt
atgcgacgtgtcgccgtgttcgtgttggtcttaagcatgccgtcaatggcggcagccttt
gccccacgacgatcctggacgaccgcgacaacaccagccggaatagaaacagccgcaaca
atggcacgccgatccttattgtccagtctcctccgagtctccacgggtacagattcagaa
aaagatacaaatgcaagtacggattcgatccaaaccgacagtgtcgttactgaggccagc
gcacgcaattccaagctggttcgcaatgttcccccctttcagcgcattctcgcagcgaat
cgcgccgaaattgctgtccgtatcatgcgagcggcgacggaactcaacgctggtacggta
gccatgtacacacacgaagatcgctattcgcagcaccgttggggggccgatcagagcttt
ttgctcgacaaaaaaaaccccacgagttcgcccatttcggcctatttggacattccgcag
ataatacgtctcgccctggatgctggtgtcgatgctatccatccaggctacggatttctg
tcggaaagcccagaattcgcgcaagcgtgtgctgacgccagcattacctttgttggacca
acggtggaaaaccttcagcgattttccgataagacctccgcccgacaagccgccatcgaa
gccgacgttcccgtcgtgcccggatcggacggtgctttggaaaccgaagcagatgttacg
gctttcgtcgaagccaacggattgcccgtcattctcaaagctgccatggggggcgggggc
aaaggcatgcgggtggttcgtcgtatggaagacttgattcccttcttccaagccgccagc
agtgaagcgctcgcgagtttcggggacggcgcagtctttgttgaacgcttcgtggaacgt
ccgcgacacattgaagtgcaaattattggagacgggaccggcaatgtggtacacttgtgg
gaacgcgattgcagtatccaacgtcgccaccaaaaggttatcgaaatggcacccgcctgg
acactgccggacgaactacgagcacagctacatgaatacgccgtccgactcacatcacaa
gccaagtacaagaacgccgggacagtagagtttttgattgatgcggaactgcgtccttac
tttatcgaagtcaatccccgcattcaggtcgaacacaccgtcacggaagaagtgacggga
atcgatttggtccaggcccagatcaaaattgccgccggagctacgctggaggaagttggt
ttggttcaagcgaatattcaaccccgtggtgtagcgatccagtgccgtgtgacgacggaa
aatcccgagcgagactttgcccccgataccgggaccgtaaccctctatcgtcactccgcc
ggtaagggtgttcgaatggacggcattggatactccggaatgactattacgccttacttt
gactccatgattgtcaagtacacggcgctgggtgcgaactttccggaaacggtcgcacgg
atgaagcgtgttttgcaagagtgccgcattcggggagtcaaaaccaatgttggattctta
ctcaacgtcttgtcgcatcccgagttcgagacgggtatcgttacgacatcctttatcgac
gaaaatccgcaactgaaacaaacgagcatgtccatgtacgactttgcgtcggaagaacaa
gccgatccgcggaagactttcgcaacagaacgtttggtacgatatctggccaacttggcc
gtcaacggacaaccacccgagttgggcgccgactcccaaaaacttacccgtaccaccgcc
atcgcggatattcccgctcccgagattcgctccgagggaaatgctgccgttccttccgat
gagtcgccaaatcaacccggttggcgtcatctgttgctcgaacaaggaccaaaagcctac
gccaaggccgtccgcgagcaccaaggtttgcttatcacggataccacttggcgtgacgcg
caccagtcattactggcgacccgcatgcggacgcaagaactcatcaagagcgccgattac
accaacatggctctcgctaacgccttttccctagaaatgtggggtggtgccacatttgac
gtggccatgcgatttttgcgcgaatgtccctgggagagactggaagcattacgggaaaaa
gtacccaatgtgccctttcaaatgttactgcggggtgccaacgccgttggatacacgaac
tacgctgacaatgtcgtgcacaagttttgcaagcaagcacacgattcgggtgttgatgtt
tttcgtgtgtttgattcattgaattacattgagaatcttcagttgggtgtcgacgcagcc
ggagaagccggtggctttgtcgaaggtgccatgtcgtacacgggagacgttgcggatccc
accaagggcaagtattcgttggagtactacatgaacttggccagcgagttggtcgacatg
ggcgtccactctctcgcaatcaaagacatggccggtctcctgacacccaaggcttccaca
ttattggtcagtgccttacgcgaagcccatccggatattcctattcatgtacacacacac
gatacggccgggagcggagtggcttccatgctggctgctgcacaagccggtgccgatatt
gtggattcgtcaatggatgctttttccggaatgacatcgcagccctcgctaggtgcgctc
gtggccaacttggcgggaaccgagcgtgacaccggcattcagctttcgaacctgccacca
cttaattcgtactgggaagacgtgcgttcgctgtacgctccgttcgagtcggggcaactg
agtgggtcgtctgatgtttacttccacgaaattccgggcggtcagtataccaatctactt
ttccagtccaagcaactcggtttgagtgatcgctggacagaaatcaaaacgaagtatgct
gaagccaatattattttaggtgacatccccaaagtcacaccttcgtccaaggttgtcggt
gacttggcacagtttttagtctcccaaaacttggaagcgaatgaggtattggaaaaggcc
gatactttggcttttcctgactcggttatcaactacttaaagggagatattggtgtccct
ccagggggatttccggaaccgttgcgaaacaaggtattgcaaagtcggaacttggaaccg
atcgaaggacgacccggaaagttcttgcctgattacaactttgacaaggaacgtgagttg
ctagaaaaacgtttcgggaaggccaacattgacgagaaggattgcctttcgtacgcgttg
tacccggatgtcttcacggaatggaaagattttcaagctttgtacggtgacgttggcaaa
ctcccaactcgcttgttcctcaacccaatgcaagtaggcgacgaagttgaaattgaaatc
gcaaagggccagaccttgatcgtggaactcgtttctatccaagacgtgaaggaggacggt
acccgcaccgtcatttttgaagtcaacggtgaaccctggtacatgccggtaacggaccag
aacttgttaggagattcggcggttcgcgaaaaggcggtcgctcctggtcaagtcggcgcg
tccatgccaggagtggtagttggcttgaaagttaaagcaggagacaccgtacaagaaggt
gaaaccgtagcgaccttgtcggccatgaagatggaaacctcaattccggcgacggcatcg
ggtgttatcaagcgtgtgcttgtcaacgtgggcgacaaggtcaacggagacgatctcatc
cttgagattgaataa

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