KEGG   Phaeodactylum tricornutum: PHATRDRAFT_5217
Entry
PHATRDRAFT_5217   CDS       T01075                                 
Name
(RefSeq) hypothetical protein
  KO
K01855  tRNA pseudouridine38/39 synthase [EC:5.4.99.45]
Organism
pti  Phaeodactylum tricornutum
Brite
KEGG Orthology (KO) [BR:pti00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pti03016]
    PHATRDRAFT_5217
Enzymes [BR:pti01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.45  tRNA pseudouridine38/39 synthase
     PHATRDRAFT_5217
Transfer RNA biogenesis [BR:pti03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    PHATRDRAFT_5217
SSDB
Motif
Pfam: PseudoU_synth_1 YjhX_toxin
Other DBs
NCBI-GeneID: 7200419
NCBI-ProteinID: XP_002179737
JGI: 5217
UniProt: B7FYG8
Position
7:876956..877804
AA seq 216 aa
SVEKALFRALRTSRLVESRASSGYSRCGRTDKGVSAAGQQTDPPLRQQRALREHAYDKIL
NNLLPDDIRVLGWIPVSDDFSARFSATSRTYRYFFRRRRTLDVEAMRQGLHRMQGTHDFR
NFCKMDVEKVYNFERRIDKAEIVNMERDTGVSYFLIVGQAFLWHQIRYMASILFAIGQGL
ETPELVTAMLDIAQNPGKPAYPLADEQPLVLHDCGY
NT seq 648 nt   +upstreamnt  +downstreamnt
tcggtcgaaaaagccctcttccgggccctccgcacgtcccgcctcgtcgaatcccgcgct
tcctcgggatactcacgttgcgggcgtaccgacaagggtgtcagcgccgccggacaacag
actgatcctccccttcgccaacaacgggcactgcgcgaacacgcgtacgacaaaattctg
aacaacttgttgcccgatgacattcgggtcctgggttggataccagtatccgacgacttt
tcggcacgcttttccgccacttcgcggacctaccggtactttttccgccgccgtcggact
ttggatgtcgaagctatgcgccaaggcctccatcggatgcaagggacacacgactttcgc
aatttctgcaaaatggatgtcgaaaaggtctacaactttgaacgccgaatcgataaggct
gaaatagtcaatatggagcgagacaccggcgtctcctactttttaattgtcggccaggca
ttcttgtggcatcaaattcgttacatggcgagtattttgttcgccatcggtcaaggcttg
gaaacgcctgagttggtcacggccatgctggatatcgcgcagaatccgggtaagccagcc
tatcctttggcggatgagcaaccgctagtgctgcacgattgtggctat

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (26)   

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