KEGG   Phaeodactylum tricornutum: PHATR_1682
Entry
PHATR_1682        CDS       T01075                                 
Name
(RefSeq) anthranilate synthase. anthranilate synthetase. chorismate lyase
  KO
K14553  U3 small nucleolar RNA-associated protein 18
Organism
pti  Phaeodactylum tricornutum
Pathway
pti03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:pti00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    PHATR_1682
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pti03009]
    PHATR_1682
Ribosome biogenesis [BR:pti03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    PHATR_1682
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 PD40 NBCH_WD40 Cytochrom_D1 WD40_like
Other DBs
NCBI-GeneID: 7204526
NCBI-ProteinID: XP_002185694
JGI: 1682
UniProt: B5Y3P6
Position
11:384775..386170
AA seq 437 aa
RPDEPAWVDEDDVGLEVNLLATSRLRKLRKSKAEVAALALCGTDLEERLRQRYQRTTQAT
ARTDWARLSDSSTLIDKDAGNNDEDSDSDFKSLSTSLLLHSTSTRRLPPNTLNLVRCPDA
NQSDPNQSVLQAVHFHPASDADQPLLLTAGLDKTLRFFQVGVDKSEKVHGIHFPKLPIYS
ASFLGSSGNVVVSGRRSFFYIYDTVAGKLELIPKILGREERSLEKCFPSPDGRTIAFVGN
DGYIILFDAHAKQWIADLKISGSVRAITFTPDGEYILASGSDGEIYRWDLRTRRCVERFT
NQDGTITSYLAASSRHLAVGAESGVVNMFSEHSMGYRAVGHVVVSERNPMKSILNLHTSA
DMVRFNGDGQILAFSSRREKNSMKLLHVPSATVFSNWPTSKTPLGFVWSMDFSPESKYLA
VGNDKGKCLLYRLMHYQ
NT seq 1311 nt   +upstreamnt  +downstreamnt
agacccgatgagccagcgtgggtcgacgaagacgatgttggattggaagtaaatttgctc
gcaacgagccgattacgaaagttaaggaaaagtaaagcagaagtagctgctcttgccctt
tgcggtaccgaccttgaggagcgtttaaggcagcgatatcaacggacaacccaagcgacg
gctcgtacagactgggctcgtttaagtgatagttcgactttgattgacaaagacgccggc
aataacgacgaggactcggactcggacttcaagtcgttatcgacttctctgttgctccac
tcgacctcgactagacgcctccctccgaacactttaaatcttgtgcgttgccctgacgca
aatcaatccgacccaaatcaatcagttctccaggcggtacatttccaccctgcatctgat
gctgaccaaccactccttttaactgcgggtctcgacaaaacgctccgattttttcaagtg
ggagtagacaaaagtgaaaaagtgcatggaattcatttccctaaactcccgatttatagt
gcttcttttttgggatcgtcaggtaatgttgtcgtgagtgggcgacggtcgtttttctat
atttacgacactgtcgcaggaaagctggaactcattcccaaaattttaggaagggaagag
cgaagcttggaaaaatgctttccctctcccgatggtcgtactattgcctttgttggaaat
gatggatacattattttgtttgatgcacacgctaagcaatggattgctgatttgaagatt
agcggtagcgtcagagcaattacgtttactcctgatggtgagtacattctagccagtgga
agtgacggagagatctatcgatgggatcttcgaacgcgtcgatgtgttgaacgattcaca
aaccaagatgggacgatcacatcttatctggcagcttcctcccgtcatctagctgtggga
gctgaaagtggtgttgtgaacatgttttcggagcacagcatgggatacagagcggtcggc
catgtcgtggtgtctgaacgcaatccaatgaagtccatattgaacctccacacgtcggct
gatatggtgcggttcaacggcgatggacaaattctagcattttcgtctcgccgtgaaaaa
aatagcatgaagttgcttcatgtaccgagcgccactgtcttctcaaactggcccacctct
aagactccattaggtttcgtttggtcaatggacttttccccagaaagcaaataccttgcc
gtgggcaatgacaaaggaaagtgcctcttataccgtctcatgcactatcaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (180)   
   KEGG ORTHOLOGY (1)   
   RefGene (175)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (193)   

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