KEGG   Paramecium tetraurelia: GSPATT00006060001
Entry
GSPATT00006060001 CDS       T01055                                 
Name
(RefSeq) hypothetical protein
  KO
K11654  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
ptm  Paramecium tetraurelia
Pathway
ptm03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:ptm00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    GSPATT00006060001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ptm03021]
    GSPATT00006060001
   03036 Chromosome and associated proteins [BR:ptm03036]
    GSPATT00006060001
Transcription machinery [BR:ptm03021]
 Eukaryotic type
  RNA polymerase I system
   Other transcription-related factors
    NoRC (nucleolar remodeling complex)
     GSPATT00006060001
Chromosome and associated proteins [BR:ptm03036]
 Eukaryotic type
  Chromatin remodeling factors
   CHRAC complex
    GSPATT00006060001
   RSF complex
    GSPATT00006060001
   WICH complex
    GSPATT00006060001
   B-WICH complex
    GSPATT00006060001
   NORC complex
    GSPATT00006060001
   BRF complex
    GSPATT00006060001
   NuRF complex (fruit fly)
    GSPATT00006060001
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII DEAD AAA_14
Other DBs
NCBI-GeneID: 5017389
NCBI-ProteinID: XP_001431605
Genoscope: GSPATT00006060001
UniProt: A0C090
Position
undetermined
AA seq 654 aa
MSNQSDDENEVLQVELASDEEQRAEEEDERIKKLEQDKKSFMSQIKSTGRMNTNIKFDNI
ESKINTLLENAEKYAMFLLHRHKRTQESKQKVQGQQRGKHRQIVEDGSEEEDFDDTPTVL
EKQPTILKGGQLKSYQLTGLNWMISLFEEGINGILADEMGLGKTIQTIGFLAFLKEYKKI
SGPYLIVAPKSTLGNWMREFKIWMPCMRVVKLIAIKEERDEILNRYFQPGKFDVCLTSYE
GVNICLKHIRRFQYKYIIIDEAHKIKNEDAIISQNLRKIRTNYKLLLTGTPLQNTPHELW
SLLNYLLPDLFDSSEVFDKWFEVNTEAKLKEGNETIHQDELEQRNLEMVQKFQKILRPFM
LRRTKAEVERMLPPKQEIHLFIKMSNLQKSMYQNILIHNNPHEGDDKGFYMNKLMQLRKI
CLHPYLFPEVEDKSLPALGEHLVDVSGKMRVLDKFLQKLSEGQHQILIFSQFTMMLNILE
DYCNFRGYEYCRIDGETEIQSRDDQIAEFTAPDSKKFIFLLSTRAGGLGINLATADTVII
YDSDFNPQMDMQAMDRAHRIGQKSRVMVYRMACEHTVEEKIIERQQIKLRWDSLMVQQGR
LQQKQNGKLLSKEDLKELTTYGASQIFKLDGDDIKDEDIDILLKRGEQLTKENE
NT seq 1965 nt   +upstreamnt  +downstreamnt
atgagtaattaaagcgatgatgagaacgaggtattgcaagtggaattggcaagtgatgaa
gaataaagagcagaggaagaagatgaaagaataaaaaaattagaacaagacaaaaagagc
ttcatgagttaaataaagtccactgggagaatgaacaccaatattaaatttgataacata
gagtcgaagataaatacactactagaaaatgctgagaaatatgccatgtttctattgcac
cgacacaagagaacctaggagagtaagcagaaggttcaaggtcagtagagaggaaaacat
agacagatagttgaagatgggagtgaagaagaagatttcgatgatactcccacagtattg
gaaaagcagcctactattttaaagggaggataattgaagtcctatcagttgactggattg
aattggatgatttctttgtttgaagaaggaattaatggaatattggctgatgaaatgggg
ttgggcaaaacaatacagacaattggattcttggcttttttgaaagagtacaaaaagatt
agcggaccttatttgatagtggctccaaagtctactttgggtaattggatgagagagttc
aaaatatggatgccttgcatgagagtagtaaaattgatagcaataaaagaagagagggac
gaaatattaaacagatatttttaaccaggaaaatttgatgtttgtttaacaagttatgag
ggagtcaacatttgtttaaagcatataagaagatttcaatacaaatacatcataatagat
gaggcacacaagataaagaatgaagatgcaatcatcagtcaaaacttacgtaaaattaga
actaattataaattattacttactggaacacccctatagaacactccacatgaattatgg
agtttattgaattacttactgcctgatctatttgattcatcagaagtgtttgacaaatgg
tttgaagtaaacacagaagcaaagttgaaagaaggaaatgaaaccatacatcaagatgaa
ttggaataaaggaatttggaaatggtctagaagttctagaagatattgagaccattcatg
ttaaggagaaccaaagctgaagtggaaaggatgcttcctccgaagtaggaaatccatttg
tttattaaaatgtctaatctgcaaaaatcaatgtatcagaatatcttgattcacaataac
ccacatgaaggagatgacaaaggcttttacatgaataaactaatgcaattgcgtaaaatc
tgtttacatccttatctattccctgaagttgaagacaagagtttaccagccttgggagaa
cacttagtcgatgtgagtggtaagatgagagtcttagataagtttctacagaaattaagt
gagggctaacatcagatactcatcttctcataatttactatgatgttgaatattctagaa
gattattgtaattttagaggttacgagtattgcagaattgacggagaaactgaaatacaa
tcaagagatgattagattgcagagtttacagctccagacagcaagaaattcatattttta
ttgtcaaccagagctggtggtcttggtatcaatttagctactgcagatactgttattatt
tatgactctgatttcaatccctagatggatatgtaggccatggatagagctcatagaatt
ggataaaagagcagagtcatggtctatagaatggcttgtgaacatactgttgaagaaaag
atcatcgaaagataatagattaaattacgttgggattcacttatggtttagtaagggaga
cttcagtagaagcagaatggcaaattattatccaaagaagacttaaaggaattaaccact
tatggagcttcacagattttcaaattggatggagatgatatcaaggatgaagatattgat
atcttacttaaaagaggtgagcaattgactaaagaaaatgaatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   GENOSCOPE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (32)   

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