KEGG   Paramecium tetraurelia: GSPATT00006374001
Entry
GSPATT00006374001 CDS       T01055                                 
Name
(RefSeq) hypothetical protein
  KO
K13171  serine/arginine repetitive matrix protein 1
Organism
ptm  Paramecium tetraurelia
Pathway
ptm03013  Nucleocytoplasmic transport
ptm03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ptm00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    GSPATT00006374001
   03015 mRNA surveillance pathway
    GSPATT00006374001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ptm03019]
    GSPATT00006374001
   03041 Spliceosome [BR:ptm03041]
    GSPATT00006374001
Messenger RNA biogenesis [BR:ptm03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     GSPATT00006374001
Spliceosome [BR:ptm03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   SR-related proteins
    GSPATT00006374001
SSDB
Motif
Pfam: PWI MSV199
Other DBs
NCBI-GeneID: 5019057
NCBI-ProteinID: XP_001433272
Genoscope: GSPATT00006374001
UniProt: A0C508
Position
undetermined
AA seq 171 aa
MAGNFFKGTSTDQDSRFGDKERKLIMNKQWPEVFNRKLNMKNIDLSVIKPWIEKKMIQYI
GIEDEVVQRQIINYLEQQSEDIRGPDPKVLSIQIMGYFEKNTLPFMTELWNLLVDAEGQD
SGIPNQLLDSKKLEYEEKKKELQRLLDRQKLLYQAIEYSEKTRKKIKSEQQ
NT seq 516 nt   +upstreamnt  +downstreamnt
atggctggaaacttttttaaagggacgtcgactgatcaggattctcgatttggcgataag
gagcgtaaactcattatgaataaacaatggcccgaagttttcaatcgcaagctaaatatg
aaaaatattgatttatcagtgataaaaccttggattgaaaaaaaaatgatatagtatatt
ggaatagaagatgaagtagtttagcgataaataattaattacttagaacaatagagcgaa
gatattagaggacctgatccgaaagttctaagcatttaaataatgggatattttgaaaaa
aatacactgccatttatgactgaactatggaatttattggttgatgcagagggacaagat
tccggaattccaaattaattgttggatagtaagaaattggagtacgaggagaagaaaaag
gaattgcaaagattattagacagacagaagttgctatatcaagccattgaatattcggag
aagacgagaaaaaaaataaaatcagaataacaatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   GENOSCOPE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (20)   

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