KEGG   Paramecium tetraurelia: GSPATT00010045001Help
Entry
GSPATT00010045001 CDS       T01055                                 

Definition
(RefSeq) hypothetical protein
  KO
K12818  ATP-dependent RNA helicase DHX8/PRP22 [EC:3.6.4.13]
Organism
ptm  Paramecium tetraurelia
Pathway
ptm03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ptm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    GSPATT00010045001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ptm03041]
    GSPATT00010045001
Enzymes [BR:ptm01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     GSPATT00010045001
Spliceosome [BR:ptm03041]
 Complex C
  Other components
   Step II factors
    GSPATT00010045001
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: HA2 OB_NTP_bind Helicase_C S1 DEAD AAA_22 AAA_19 AAA_30 T2SSE Flavi_DEAD ATPase SRP54 AAA_16 AAA_29
Motif
Other DBs
NCBI-GeneID: 5026955
NCBI-ProteinID: XP_001441170
Genoscope: GSPATT00010045001
UniProt: A0CSK6
Position
undetermined
AA seq 1115 aa AA seqDB search
MNQLLQLQYISLCSRVLQELENHTGIKDKVLAEYIIDLGRQSKDEKEFKQKLDAAKADFT
DQFTNSLFNIIKKMSPQEKKEVEQPPQIEQVVKEQKFPGLALPNREVVQLEDMEEQSRSR
SLSKNKKKKKDKKKKKDKNKDKDKEKEREKDKEKKDKKEPSSSPQRTHRDIEKGHIYEGV
VTKVQDFGVFVQIAGFKGRKEGLVHISNIREKRVTNPFDILKRNQKVFVKVISIVNEKIS
LSMRDVDQNSGQEIEKKAKAMNEYDQVIKQQEQSKDNNRYGAITGVKLDLAQDACKKKAK
RIASPDLWEKTRLEYNSKLVRQIDNKAIVEDSESEGFVSDSEDLEIDMNDYEPPFLKGQT
TKAGINLSPIRVVKNPEGTLQREALHAQQLARERREMREQQQRAINEQNRDKYREDPLAQ
ISGNMNQMQVEIPEWKKEAMFKSSVRNRTHMSIKEWRESLPIYNFKNELLAAIKENRILI
VIGETGSGKTTQITQYLMEAGYGRNGMKIGCTQPRRVAAMSVAKRVAEEMGVQLGDEVGY
AIRFEDCTGPNTIIKYMTDGMLLREALIDKDMSQYSVIMLDEAHERTINTDVLFGLLKQV
VAKRNDFTLIVTSATLDAEKFSSYFFNCKIFRIPGRNFPVEVFFTNEPEEDYLEAAQLCV
IQIHLEEPAGDILLFLTGQEEIDTACQVLHERMKKLGPDAPELIILPVYSALPTELQQKI
FDPAPTGARKIVIATNIAEASITIDGIYYVVDPGFSKIKVYNPKLGMDSLIIAPISQASA
QQRAGRAGRTGPGKCYRLYTESAFNTEMLPTSVPEIQRTNLANTILLLKAMGIHDLLNFD
FMDPPPVQTMIAAMEQLYALGALDDEGLLTKVGRKMAEFPLEPPQAKMLLTAVDLGCVDE
IITIIAMLSEPNIFYRPKDRQQLADQKKARFHRPEGDHLTLLTVYEHWKKNNFSNVWCHE
NYIQARSMRRAQDVRKQLLQIMERYKFQITSCGKDFWKIRKAITAGYFFHVAKKDQAEGY
KTLSDNQQVYIHPSSALFNKGPLWCVYHELVMTSKEYMREVCEIEPRWLIEVAENYFKAH
NQMGQLSKTKKSEKLDPLSCKFGDANAWRLSKRKG
NT seq 3348 nt NT seq  +upstreamnt  +downstreamnt
atgaattagttactacaattatagtatatttctttgtgttcaagagtgctgtaagaatta
gagaatcatacagggataaaggacaaggtgttggctgaatatattattgatttaggtaga
caaagtaaggatgaaaaggaatttaaataaaagttggatgcagcaaaagctgattttaca
gatcagtttacaaattctttattcaatatcatcaagaagatgtctcctcaagaaaaaaag
gaagtagaacagccaccataaatagaataggtagtgaaagaatagaaattccctggatta
gcattaccaaatcgtgaagtggtttaattagaggatatggaagagtaatcacgatcaaga
tcattatcaaaaaacaagaagaagaagaaggataagaaaaagaagaaggacaaaaataag
gacaaggataaagaaaaggagagggaaaaagataaggagaagaaggataaaaaggagcca
tcttcatccccacagaggactcatagagatatcgagaagggacatatatatgagggtgta
gtaacaaaggtgcaggattttggagtgtttgtgtagatagcaggttttaaaggcagaaag
gaaggcttagtccatatttccaatataagagagaaaagagtgaccaatccttttgatatt
ttgaaaagaaattagaaggtgtttgtgaaagtgattagtattgtgaatgaaaaaatatca
ttgtcaatgagagatgtggattaaaatagtggttaagagatagagaagaaagctaaggca
atgaatgaatatgatcaagtgattaaataataggagtagagtaaggataataatagatat
ggagcaataacaggagtcaaattggatttagcataggatgcttgtaaaaagaaagctaag
agaatagcatctccagatttatgggagaagactagattggaatacaattcaaaattagtt
cgttagatagacaataaagctattgtggaagattcagagtcagaaggttttgtttcagac
tcagaagatttggaaatagatatgaatgattatgaacctccttttttaaagggataaaca
acgaaggcagggataaatttatcaccaattagagttgtgaaaaatccagaagggacttta
taaagagaagctttacatgcttaatagttggcaagggaaaggagagaaatgagagaataa
caataaagagcaataaatgagtagaatagagataaatacagagaggatcctttagcttag
atttcaggaaatatgaattagatgtaagtagaaattcctgagtggaagaaagaagcaatg
ttcaaatcaagtgtaagaaatagaacacatatgagtattaaagaatggagagaatcttta
ccaatttataatttcaagaatgaattgttggctgccattaaagagaatcgtattctcata
gtaataggagaaacaggtagtggtaaaactacttagatcacataatatttaatggaggct
ggatatggtagaaatggaatgaagataggttgcacttaacctagaagagtggcagcaatg
tcagtggcaaaaagagtggctgaagaaatgggagtgtaactaggagatgaagtaggttat
gcaataagatttgaagattgcacaggtcctaatacaattattaaatatatgacagatgga
atgttattaagagaagcattaatagataaagatatgagtcaatatagtgttattatgtta
gatgaggcacatgagagaacaattaatactgatgtgttatttggattattaaaataagtt
gttgctaaaagaaacgatttcacattaattgtaacatcagccactttggatgctgaaaag
ttttcttcttatttttttaattgtaagatatttagaattccaggacgtaactttcctgtt
gaagtgtttttcacaaatgaacctgaagaagactatttagaagctgcctaattgtgtgta
atttagattcatttagaagaaccagctggtgatattctattgtttttaacaggacaagaa
gaaatagacacagcatgttaagtgcttcacgagagaatgaagaagttgggtccagatgct
cctgaattgattatcttacctgtttattctgctttacccacagaattacaacagaagatt
tttgatcctgcccctactggagccagaaagattgttatagcaactaatattgctgaagca
tcaatcactatcgatggaatttattatgtggttgatccagggttctctaaaatcaaggta
tataatccaaaattgggtatggattcattaattattgctccaatcagttaggcatctgca
taataaagagctgggagggcaggaagaactggcccaggaaaatgctatagattatatact
gaatcagcatttaatacagaaatgttacccacttcagtacctgaaatatagagaactaat
ttagcaaatacaattttattattaaaagctatgggaatacatgacctattgaattttgac
tttatggatcctccacctgttcaaactatgattgcagctatggaataattgtatgcattg
ggagctttggatgatgaaggattgctaacaaaagtaggtaggaagatggcagaattccct
ttggaaccacctcaagccaaaatgttattgactgcagttgatctgggatgtgtggatgaa
atcattacaatcatagcaatgttatcagaaccaaatattttctacaggccaaaagataga
taacaattagcagatcagaaaaaggccaggtttcatagaccagagggtgatcatttaaca
ttgttaacagtctatgagcattggaagaagaacaattttagtaatgtgtggtgtcatgaa
aattatatctaagcaagatccatgagaagagcttaagatgttagaaaacaattattataa
attatggaaagatataagttctaaattacttcttgtgggaaggacttctggaaaatcaga
aaagctattactgctggttatttcttccatgttgctaagaaagattaagctgaaggatat
aaaactctatctgataatcaataagtctatatccatcctagtagtgcattatttaacaaa
ggaccgttgtggtgtgtgtatcatgagctagtcatgacttcgaaagagtatatgagagaa
gtatgtgaaatagaacctagatggcttattgaagttgctgaaaattatttcaaggctcac
aatcaaatgggataactctcaaaaacaaagaaatcagagaaactcgatccattaagttgc
aagtttggagatgcaaacgcatggagactaagtaagcgtaaaggttga

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