KEGG   Paramecium tetraurelia: GSPATT00020242001
Entry
GSPATT00020242001 CDS       T01055                                 
Name
(RefSeq) hypothetical protein
  KO
K15692  E3 ubiquitin-protein ligase RNF13 [EC:2.3.2.27]
Organism
ptm  Paramecium tetraurelia
Brite
KEGG Orthology (KO) [BR:ptm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ptm04121]
    GSPATT00020242001
Enzymes [BR:ptm01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     GSPATT00020242001
Ubiquitin system [BR:ptm04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    GSPATT00020242001
SSDB
Motif
Pfam: zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-rbx1 zf-RING_11 zf-RING_UBOX zf-ANAPC11 zf-RING_5 zf-C3HC4_3 SCIMP Orf78 zf-RING_16 DUF4834 zf-Nse Shisa zf-RING_6 NCU-G1 PRIMA1 LapA_dom Sigma_reg_N DUF4381 Cys_box TMEM154 FANCL_C zf-C3HC4_4 ASFV_J13L zf-RING_10 DUF6249
Other DBs
NCBI-GeneID: 5039753
NCBI-ProteinID: XP_001453968
Genoscope: GSPATT00020242001
UniProt: A0DU54
Position
undetermined
AA seq 382 aa
MSKLLCFKTIGLFYLFMILIKFQFQTPLRVTTQVFMKREEPDSLKSNPMAKLFTSQHILI
ALGEIIIQPYGEAKMSIVTTVARIQESAMQISVLQKDDGCECIAGYVGSDCHQQALEILE
DKNYIYFYGDETQFFYLNIDNYDQMDIELKLSTNSYQGIEIILQLTNAIIIPSQYQLSKE
ESYIQQYKIYDTQPQELIYRSLSSSNDNIQLVFVARPINSPLDTIVSTLTIELSKYDKSE
NTFSIIVIIIIVVVISVAVIIIIILFFVCKSVRKRKMLRMQARLRMARLEGQQQNQITQQ
QDYENLYDLLTPIPLQDCNNQDSCAICLDNLNNNQEVRQTHCHHNFHSLCIREWLQKNKK
ECPVCRSNLAIKDVKTHQEPNQ
NT seq 1149 nt   +upstreamnt  +downstreamnt
atgtctaagttactttgttttaagacgattggtcttttttacttatttatgatcttaatt
aaattccaattttaaactcctctaagggtgactacataagtttttatgaaaagagaagaa
ccagattccttaaaatcgaacccaatggcaaaattatttacatcacagcacattctaata
gctctaggggaaattataatataaccatatggggaagcaaagatgagtattgtgacaaca
gttgctcgaatttaggagagtgctatgtaaatatcagttctataaaaggacgatggatgc
gaatgtatagctgggtatgtaggatctgattgtcattaacaggcgttggaaattctagag
gataaaaattacatatacttttacggagatgagacttaattcttctatctgaacatagat
aattacgattaaatggacattgaattgaagctaagtactaacagctactaagggattgaa
ataatattgcaactaaccaatgcgataatcattccaagctaatatcaattgagtaaagaa
gagagctatatataacaatacaaaatatatgacacttagccataagagcttatctatcgt
agtcttagttcttccaacgacaatatttagctggtttttgtagcaagacctataaatagt
cccttggatacaattgttagcactttaacgatagaactctcaaaatatgataagtccgaa
aataccttttctataattgtaataattattattgtcgttgtcatctcagtagcagtgatt
ataattattatattgttttttgtatgcaaaagcgttagaaagagaaaaatgctaagaatg
taagcaaggttaagaatggctagattagaaggttagcaataaaatcagatcactcaataa
caagattatgagaatctttatgatttactcactccaattcctttataagattgtaataat
taagatagttgtgccatttgtttagacaacttaaacaataattaagaagtcagataaacc
cattgccatcataattttcattctctttgtataagagagtggctttagaaaaataaaaaa
gaatgtcctgtttgtagatcaaatttggcgattaaagatgttaagacccatcaagaacca
aatcaatga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (37)   
   KEGG ORTHOLOGY (1)   
   RefGene (32)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   GENOSCOPE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (28)   
   Pfam (28)   
All databases (73)   

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