KEGG   Paramecium tetraurelia: GSPATT00027451001
Entry
GSPATT00027451001 CDS       T01055                                 
Name
(RefSeq) hypothetical protein
  KO
K22377  E3 ubiquitin-protein ligase listerin [EC:2.3.2.27]
Organism
ptm  Paramecium tetraurelia
Brite
KEGG Orthology (KO) [BR:ptm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ptm03009]
    GSPATT00027451001
   04121 Ubiquitin system [BR:ptm04121]
    GSPATT00027451001
Enzymes [BR:ptm01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     GSPATT00027451001
Ribosome biogenesis [BR:ptm03009]
 Eukaryotic type
  Pre-60S particles
   Ribosome quality control proteins
    GSPATT00027451001
Ubiquitin system [BR:ptm04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    GSPATT00027451001
SSDB
Motif
Pfam: zf-RING_2 zf-rbx1 FANCL_C zf-ANAPC11 zf-C3HC4 zf-C3HC4_2 zf-RING_16 SIR2 zf-RING_11 C1_1 RINGv zf-RING-like
Other DBs
NCBI-GeneID: 5008734
NCBI-ProteinID: XP_001462495
Genoscope: GSPATT00027451001
UniProt: A0EII1
Position
undetermined
AA seq 1494 aa
MINQTTNLFSQLANQYLKGEIEQDVITDPEIQKIVHGLQKKSETTKSKTLSELKTILPNK
SQEFFDQFTPTFVNIYRRYVDNEYERRVLELANQVLSLICEYGKKSLSKKFKQLFPQWFI
MINDYNSEISTAAMNAFQVAFPTKEKQVQAIKMCSDQYIIDLKLYLSLSIATIKQESNLE
DEKVDHIYERLKVSTINSIKTAIQWNPDNDFIEQIMKLLDFTNKTTIIVELLNTQKTRIV
ATIIETLHFLLSNEVSAPFVLNKSDPLLKKTVQLFEQKDRLIVSALWKGFVTKLFQRVQQ
DQILKLQGLENKSLELISKAGFGVGKLLYDQLVVFVSLNPVYSVVDIKKEEVYRQKLASM
TKLLNAILSGITHEESRFFSENLINSYFETLYFLICKRMIPPLVQYNQCLGQVKNIIVQS
IRSVLQNTLSQQGGQAYNHSPYKQVPASLLQFLNILKVKEEQQEFLNEIIKAITAEFKTL
QLDDYSVFVNIIQQLLKVKEESPAYQAVQQYLISVFDEIYNNNDFDKGSQLFEIIPNSKN
FKRENFGQKIQEIINNLFSSIEMVSSEEVLKRCAQIKICIYNLQRINQQQLIESILQKII
TQEYKQVIPKEEQQSFKLKWICLHNLVDASLDPQFYQKYLTMKDSQLEYNLIEKFVKYQQ
LQQNETFVTKFLSQSLSITNLSQKIFIPCIIQNANQQILNILISKYTQIGQSVIKTMDKN
YLQIFEELSYVMNKLQPQQLIFDVLLQLYLKNQSHKGTFLFKLINKKYQDLFVQFFQTTL
PLIRTDTLNQHLHFFQDLFAQLNSQDLLQFLNFNFQSPISWKILSLIEIPQDYFKKMYQN
NQLELLAVFLASNYSSIMLYDHKLKRFIQNIVGNQIIPIFLDSYEQQEPKSLDLIKVLFN
NTDIVYGVALKNLIKQIIIEERENNYRSKQTDQLAQLIVDQLKIALDGNNVNKLITIRQI
INVVDLKQQFQNVLQTYYQSNKISYLDLYTLLLRQQPNLLELEDEAELDKIIKLLFEMNL
ESNYDKMVAFDFINLICERKTITPFAAYIKQINNLFRQLFQQNVQLKRFYSFSIVSALQF
VRKILNFIEAFPIEFIDYLNFELTDSLLQIIQFCENPNPEFMDEQNDTLFIEYAETLLRC
IQMEQWQKIDDTIYYQLLQCPFISIQKAAFIALKNIQDHSGLSPVLDGFDMKKEEMRRLR
QEDEEDVEDIITFPLDGKILTNLLAWLVVLQNKNCVQFKDKYPTYLSNLLYILQFLNDNG
VMARFNYKEIYQQDLNLMVIQDDQSELLKMIVISFYQFIVAQQSYFKQWYNQECNTTQKK
QLEDLLQIISKAIYTREIELIELNQEEWRSEGFDIFISKNQQEITATYQKEEQKIEILIQ
VPVGFPLKPLKVETKKGVKISEDKLKKWSLMIRMILQNENDTILTALKLWKKNIDQQFQD
LEECAICYYIIHQNGELPKMACRTCKHKFHSTCIQKWFHSSNKSDCPLCKSQFL
NT seq 4485 nt   +upstreamnt  +downstreamnt
atgatcaatcaaaccacaaacctattcagctaactagctaatcaatatttgaaaggggag
atcgagcaagatgtaattacagatccagaaatccagaagattgttcatggtctccaaaag
aagagtgagacaaccaaaagtaaaacactatcggaactcaaaactatattgccaaacaaa
tcacaagaattcttcgatcaattcacacctacatttgtaaatatatatagaagatatgtt
gataatgagtatgaaagaagagttttggaattggccaatcaagtgttatccttaatttgt
gaatacggaaaaaaatccttatccaagaagttcaaacaattgtttccacaatggtttatt
atgatcaacgattacaattccgaaatctcaactgctgccatgaacgcctttcaagttgcc
ttcccaactaaagaaaaataagtgcaagctatcaaaatgtgcagtgatcaatacataatt
gacttgaagttgtacctgtccctctccatagccactatcaaataggaatccaatctggaa
gatgaaaaagttgatcacatctatgagagattgaaagtatcaacaatcaactccatcaaa
acagccatacaatggaatcccgataatgacttcatcgaataaatcatgaaactactcgat
tttactaacaagactaccatcattgtagaattgctcaacactcagaagaccagaattgta
gcaaccatcattgaaacactccattttctcttgtcaaatgaagtatcagctccctttgtc
ctcaataaaagcgatcccttgctcaaaaagactgtttaactcttcgaacaaaaagatcgc
ttgattgtaagtgcattatggaaaggatttgttactaagttattccaaagagttcaatag
gatcagatcttaaaactctaaggccttgaaaataaatctttggagttaatatccaaagct
ggttttggagttggtaaattattgtatgatcaattggtcgtatttgtatctctgaatcct
gtctacagcgtggttgatattaaaaaggaggaggtttacagatagaaattggcctccatg
acaaaattactcaatgccatactgtctggtattactcatgaagaaagcagatttttttca
gaaaacctaatcaatagttattttgaaacactctactttctaatttgcaagagaatgatt
cctcctctggtgcaatataatcaatgtttaggataggttaaaaatatcattgtgcaatca
atcagatcagtcctctaaaatactctgtctcaataaggtggttaagcatataatcatagt
ccatataaataagtgccagctagtttgttgtagttcttgaatattttaaaggtcaaagag
gaataataagaattcttgaatgaaatcataaaagctattaccgctgagttcaagactctg
taattggatgattattcagtgtttgtgaacataatttaatagctactcaaagtaaaggag
gagagtcctgcctatcaagctgtttaacagtatctgatttcagttttcgatgaaatctac
aacaataatgattttgacaaagggtcttagctgtttgaaatcataccaaattctaagaat
tttaagagggagaactttggttaaaagatttaggaaataatcaataatttgtttagttcc
attgaaatggtttcatcagaagaagtattgaagagatgtgcctagattaagatatgcatc
tataacttacaaagaataaatcaataacaattaattgaatccattttataaaagatcatt
actcaagagtacaagtaagtaattccaaaagaagaatagcaatctttcaaattaaaatgg
atttgcttacacaatcttgttgacgcaagtctcgatccataattttatcaaaagtattta
actatgaaagattctcagttagaatacaatctcattgagaaattcgttaagtattaacaa
ttacagtagaatgaaacttttgtaactaagtttttaagttaatccctaagcatcacaaac
ttaagctaaaaaatattcattccttgcatcatttaaaatgctaattaataaattttaaat
atactgatttctaaatacacctaaataggctaatcagttattaagactatggataaaaac
tacctctaaatattcgaagaattatcatacgttatgaataagctacagccataatagtta
atatttgatgttctcttacaattgtacttaaagaattaaagtcataaaggcactttcctc
tttaaattaattaacaaaaagtattaggatttgtttgtttaattcttttaaactactttg
ccattaataagaactgataccttaaattaacaccttcatttcttccaagatctctttgca
taattgaatagccaagatttattatagtttttgaattttaacttttaaagtcccatatca
tggaaaatcttgtctttgattgaaattccataggattacttcaaaaaaatgtattaaaat
aatcaattggaattattggctgtatttttagcttccaattattcatccatcatgttgtat
gatcataagttgaagagattcatctaaaatatcgttggaaatcaaataattcccatcttc
ctagattcatatgaacaataagaaccaaaaagcttggatctcataaaggtgctgttcaac
aacactgacattgtttatggagtggctcttaaaaacctaattaaataaataataatcgag
gagagagagaataactatagatcaaaataaacggattaattggcataactaattgtggat
taacttaaaatagctttggatgggaacaatgtgaataagttgataactatcagataaata
ataaatgtagttgatttgaagcaacaattccaaaatgtcttgtagacttattatcagagt
aataagatttcatatttggatctgtatactcttttgctaagataataaccaaatctttta
gaattagaggatgaggcagaattggataagattataaaattgttatttgagatgaatttg
gaatcaaattatgataaaatggttgcttttgactttataaatttaatttgtgaaagaaag
accatcactccttttgcagcatacattaaataaattaataatttgtttagataactattt
taatagaatgttcaattgaaacgattctattcattcagtattgtgtcagcactttaattt
gtgagaaagatattgaactttattgaagcatttccaatagaatttatagattatctgaat
ttcgaattaacagattccttattataaataattcaattttgtgaaaatccaaatccagag
tttatggacgaataaaatgatactctatttatagaatatgcagagactctattgcgttgt
atttagatggaacaatggtaaaagatcgatgatacaatatattaccaattactctaatgt
ccattcattagtatctaaaaggctgcatttattgcattaaagaacatataagatcacagt
ggtttgagcccagttttagatggatttgatatgaaaaaagaagaaatgagaagattgaga
caagaggatgaagaagatgtggaagatatcataacattccctcttgatggtaaaatatta
accaatttactggcttggctggttgttttgtagaataagaattgtgttcaattcaaagat
aagtatcctacctatttgagcaatcttctatatatattataattcttgaatgacaacgga
gtcatggcaagattcaactataaggaaatttattaataggatttaaatctaatggtaatt
taggatgaccaatctgaattattaaagatgattgtcatctcattttattaatttattgtt
gcttaatagagttattttaagtaatggtacaattaggaatgcaatacaacttaaaagaaa
taattagaggatttgctctagattatcagtaaagcaatttacacaagggaaattgaattg
attgaattaaattaagaggaatggcgtagtgaaggtttcgatattttcatttctaaaaat
caataagaaataactgcaacttattagaaggaagaataaaaaatagaaatcctcatttaa
gttccagttggttttccattgaaacctttgaaagtggaaactaagaaaggagttaagatt
agtgaagacaaattaaaaaagtggagtctaatgataagaatgatcttacaaaatgaaaat
gatacaatattaactgcattgaaactatggaagaaaaacattgattaacaattctaagat
ttggaggaatgtgctatttgttattatatcatccattagaatggagaattaccaaagatg
gcttgtagaacatgcaaacataaattccattcaacttgtatttagaaatggtttcatagt
agcaacaaaagcgattgccccttatgcaagagttaatttttatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (64)   
   KEGG ORTHOLOGY (1)   
   RefGene (59)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   GENOSCOPE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (12)   
   Pfam (12)   
All databases (85)   

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