KEGG   Paramecium tetraurelia: GSPATT00029022001
Entry
GSPATT00029022001 CDS       T01055                                 
Name
(RefSeq) hypothetical protein
  KO
K20179  vacuolar protein sorting-associated protein 11
Organism
ptm  Paramecium tetraurelia
Pathway
ptm04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:ptm00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    GSPATT00029022001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ptm04131]
    GSPATT00029022001
Membrane trafficking [BR:ptm04131]
 Endosome - Lysosome transport
  Tethering complex
   CORVET complex
    GSPATT00029022001
   Hops complex
    GSPATT00029022001
SSDB
Motif
Pfam: DnaB_2 zf-C3HC4 zf-C3H2C3 zf-C3HC4_2 Kelch_6
Other DBs
NCBI-GeneID: 5011169
NCBI-ProteinID: XP_001425385
Genoscope: GSPATT00029022001
UniProt: A0BHH0
Position
undetermined
AA seq 525 aa
MQKIDSLEPTQAIATHFLDISNIEQLVQYLEKLHQQTKVEKHHTALLLNCYIKLRQFDNF
IEKIEKYGFESELFDIETAIRECRSSNYLDIALKMASKKNIYQACLQIYIFDKAECGAAL
EYIRDTIILEEKATYLKEFGLELMRSEPQFTLEVIQNLILLINIVQNLKKQFESRKGIDS
LDRLTQEQQKVWKYFNLNNDQLANIYSITFCKPDEFLHIFGGYNSYLERYLRFLIEECKN
LPNEMAIFHRYFSYHLERFERKEEVKESEKRIMSLLLDDKNESKYDKNHLLVQFKIYNFT
EGIICLLKKLQMREELLNFYITKKDNEEILNLCTEYGEQEQNLWVLALKYFAKPENKATH
YIPNILKELSKLESISSFLILDIMKENSNVKFGQMRDFLKQQLQRDYTEIKDNLNVIKEN
MQQTSETRTEFQQLKTQAQIFSFGKCTACDNALVNPSFHFICGHQYHQNCIQIEDKKRIC
MRCNLEIQMIQNKQKEVDNSNEQMVNLRSKMLETSSKFDIISKYK
NT seq 1578 nt   +upstreamnt  +downstreamnt
atgtaaaaaattgatagtttagaacccacttaagctatagccacgcattttcttgatata
tcaaatattgaacaattagtttagtacttagaaaaactgcactaataaactaaggtggaa
aaacatcacacagccttattactaaattgctacattaaattaaggcaattcgacaatttt
atagagaaaatagagaagtatgggttcgaaagtgaactatttgatattgaaacagcaata
agagaatgtcgatcatccaattatcttgatattgcattaaaaatggcatcgaagaaaaac
atctaccaggcctgtctccaaatatatatatttgacaaagctgaatgcggagctgcacta
gaatatattagagacacaataatattagaagagaaagctacttatttgaaggaatttggt
cttgagttaatgaggagtgaaccttaatttactttagaagtaatctagaatttaatcttg
ttaatcaatattgtatagaacctaaaaaagcaatttgaatcaagaaagggtattgattca
ttagacaggttaacttaagaacaatagaaagtttggaagtacttcaatttgaataatgat
caattagcaaatatttattcaattacattttgcaagcctgatgaatttttacacatattt
ggaggatataatagttatttagaacgatatttaagatttcttatagaagaatgcaagaat
ctacctaatgaaatggccatatttcatagatattttagttatcatttggagagattcgaa
agaaaggaagaagtaaaggaaagtgaaaaaagaattatgagtttactgttggacgataag
aatgaatcaaaatatgataaaaatcacttgttggtgcaattcaaaatttacaattttaca
gaaggaatcatatgtttattgaagaaactctaaatgagagaggaactcttgaatttttat
attacaaagaaggataatgaagaaatattaaacttatgtactgagtatggcgaataagag
taaaacttatgggttttagcattgaagtattttgctaaaccagaaaacaaggctactcat
tatattccaaatatactgaaggaattgagtaaattggagtctatttcttcgtttttgatc
ttagacattatgaaggaaaacagtaatgtgaagtttggtcaaatgagagatttcttaaag
taataattacaaagagattatacagaaattaaagataatttgaatgtgataaaagaaaac
atgcaataaacaagtgagactagaacagaattttaataattaaagactcaagcatagata
ttttcattcggaaagtgtacagcatgtgataatgccttggttaatccatcttttcatttc
atatgtggacatcaatatcattaaaactgcatttaaattgaagacaagaaaagaatatgc
atgagatgcaatttggagattcaaatgatataaaataaacaaaaagaagtagataattca
aatgaataaatggtgaatctcagatctaaaatgcttgaaactagttcaaagtttgatatc
atttcaaaatataaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (31)   
   KEGG ORTHOLOGY (1)   
   RefGene (26)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   GENOSCOPE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (43)   

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