KEGG   Pseudoalteromonas translucida KMM 520: PTRA_a0837
Entry
PTRA_a0837        CDS       T04220                                 
Symbol
rumA
Name
(GenBank) 23S rRNA (uracil1939-C5)-methyltransferase
  KO
K03215  23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
Organism
ptn  Pseudoalteromonas translucida KMM 520
Brite
KEGG Orthology (KO) [BR:ptn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ptn03009]
    PTRA_a0837 (rumA)
Enzymes [BR:ptn01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.190  23S rRNA (uracil1939-C5)-methyltransferase
     PTRA_a0837 (rumA)
Ribosome biogenesis [BR:ptn03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    PTRA_a0837 (rumA)
SSDB
Motif
Pfam: tRNA_U5-meth_tr Methyltransf_31 TRAM MTS Methyltransf_25 Met_10 Methyltransf_23 Methyltransf_15 FtsJ Cons_hypoth95 PrmA PCMT Methyltransf_11 N6_N4_Mtase RrnaAD DNA_methylase DOT1
Other DBs
NCBI-ProteinID: ALS32142
UniProt: A0A0U2X4B3
Position
I:807008..808333
AA seq 441 aa
MAQIFKATKKPLKQQSLVLDITAMDHHGRGIAKHNNKVCFVSNALPNEQVKATIVADKAR
YSEAQTHKVLQASEYRVAPFCEHYNQCGGCQLQHLDSGQQVVEKQIAVSKLFEKFAKLDE
LNWQAPLLSKATHYRRSARLAVMFDKTAKKMRVGYRASGSKSIISINECPVLSEVFANVF
TVFDNLINQHKALHCVSHLQLCQGDEQNFVIIRHTKPIPESIKALVSQSAAEQQWQLVWQ
SESEVIEHSHLAMPFYALEELGLKFEFGLNNFIQVNASVNQAMLKQAQNWLALKGDENVL
DLFCGIGNFSLVLAKQAKTVIGVEGVASAVAMATQNAHTNLIANAQFNCFDLTNKIETAS
WFNKNLDVLVLDPSRTGAITVLEQLPLKQFKTILYVSCDPVTLARDSAIISQAGFELHKI
GLMNMFPHTGHIETMALFQRR
NT seq 1326 nt   +upstreamnt  +downstreamnt
atggcgcaaatatttaaagcaacaaaaaaaccgctaaaacaacagtctttagtgctcgat
atcaccgccatggatcaccatggccgcggcatagcgaaacataataataaagtgtgcttt
gtaagtaatgctttgccaaacgagcaagtaaaagccaccattgttgccgacaaagcgcgt
tacagcgaagcgcaaacacataaagtattacaggcgagtgaatatcgcgtagcgccgttt
tgtgagcattataatcaatgtggtgggtgtcagttgcagcatttagatagcggccaacag
gtagtcgaaaagcaaatagcggtgagcaaattatttgaaaaatttgccaagctagatgaa
ttaaactggcaagcccccttattaagtaaagccactcattacagacgaagtgctcgttta
gcggtaatgtttgataaaacagcaaaaaaaatgcgtgtaggctatagagcaagtggctct
aaaagtattattagtattaatgaatgcccagtactaagtgaagtatttgcaaatgtattt
actgtatttgataacttaattaatcaacacaaggcactgcattgtgtatctcacttgcaa
ttgtgccaaggcgatgagcaaaactttgttattattcgccacacaaaacctattccagag
agtataaaagcactggtatcgcaaagcgccgctgagcaacaatggcagctagtgtggcaa
agcgaaagtgaagtgattgaacactcacatttagccatgccattttatgcacttgaagag
ttagggttaaagtttgagtttggcttaaataactttatccaagttaatgctagcgttaat
caagcaatgcttaaacaagcccaaaattggctggcactaaaaggcgacgaaaacgtatta
gatttattttgtggtattggtaacttttcattagtgctggcaaaacaagcaaaaacagta
attggtgtagaaggggttgcttcagcggttgcaatggcaacgcaaaatgcgcacactaac
ttaatcgctaatgctcaatttaattgctttgatttaacaaataaaattgaaacggcttcg
tggtttaataaaaatttagatgtactggtgctagacccctcacgtactggggcaataacc
gtattagaacaacttcctttaaagcagtttaaaactattttatacgtctcatgcgaccct
gttactttagcccgtgacagcgctattatttcgcaagcaggctttgaactgcataaaatt
gggctaatgaatatgtttccgcacaccgggcatattgaaactatggcgttatttcaacgg
aggtaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (17)   
   Pfam (17)   
All databases (26)   

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