KEGG   Pseudoalteromonas translucida KMM 520: PTRA_a1627
Entry
PTRA_a1627        CDS       T04220                                 
Symbol
hupA
Name
(GenBank) DNA-binding protein HU-alpha
  KO
K05787  DNA-binding protein HU-alpha
Organism
ptn  Pseudoalteromonas translucida KMM 520
Brite
KEGG Orthology (KO) [BR:ptn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ptn03032]
    PTRA_a1627 (hupA)
   03036 Chromosome and associated proteins [BR:ptn03036]
    PTRA_a1627 (hupA)
   03400 DNA repair and recombination proteins [BR:ptn03400]
    PTRA_a1627 (hupA)
DNA replication proteins [BR:ptn03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    PTRA_a1627 (hupA)
Chromosome and associated proteins [BR:ptn03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    PTRA_a1627 (hupA)
DNA repair and recombination proteins [BR:ptn03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      PTRA_a1627 (hupA)
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_euk_1 HU-CCDC81_bac_1 HU-CCDC81_bac_2 HU-DNA_bdg NA37 Arm-DNA-bind_4
Other DBs
NCBI-ProteinID: ALS32811
UniProt: A0A0U2WLK2
Position
I:1482842..1483111
AA seq 89 aa
MNKAQLVTAMAQKSELTKKDAQAALTSLQKVITKSLAEGDQVQINGFGTFALSYYPARTG
RNPQTGASIEIEGANKAVFKASKTLKDLL
NT seq 270 nt   +upstreamnt  +downstreamnt
atgaataaagcacaactagttaccgctatggctcaaaaaagtgagttaactaaaaaagac
gcacaagcagcacttactagtttacaaaaagtaattactaagtcgcttgcagaaggggat
caagtacaaataaacggttttggtacttttgcattaagctattaccctgcacgcactggg
cgtaatccacaaaccggtgctagtattgaaattgaaggggctaataaagcggtgtttaaa
gcttctaaaacgttaaaagaccttctttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (17)   

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