KEGG   Planktomarina temperata: RCA23_c05660
Entry
RCA23_c05660      CDS       T03229                                 
Name
(GenBank) putative efflux transporter, RND family, membrane fusion protein
  KO
K03585  membrane fusion protein, multidrug efflux system
Organism
ptp  Planktomarina temperata
Pathway
ptp01501  beta-Lactam resistance
ptp01503  Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:ptp00001]
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    RCA23_c05660
   01503 Cationic antimicrobial peptide (CAMP) resistance
    RCA23_c05660
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ptp03036]
    RCA23_c05660
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:ptp02000]
    RCA23_c05660
   01504 Antimicrobial resistance genes [BR:ptp01504]
    RCA23_c05660
Chromosome and associated proteins [BR:ptp03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Divisome proteins
    RCA23_c05660
Transporters [BR:ptp02000]
 Other transporters
  Accessory factors involved in transport [TC:8]
   RCA23_c05660
Antimicrobial resistance genes [BR:ptp01504]
 Gene sets
  Multipdrug resistance modules
   Multidrug resistance, efflux pump MexAB-OprM [MD:M00718]
    RCA23_c05660
SSDB
Motif
Pfam: HlyD_3 Biotin_lipoyl_2 OEP ATG14
Other DBs
NCBI-ProteinID: AII86125
Position
606597..608030
AA seq 477 aa
MGLFLLAATLALFAYAIMMVRGAIENKGDDQRRGGGGRERVFAVNAVPFEPGQHIPVLQV
FGEVQSQRSLDIRPAVGGTVIELHPNFQNGGSVLEGDVLLRIDPSNAQTALALVQADMAD
AQADLREAMRALDLAKDEISAAQEQAALRQKALARQQDLVTRGVGTAASVEAAELAASSA
RQSVLARRQALQAAEARLDQARARVMRVDISLAEAERNVRDTVVRAAFSGLLANVTVLQG
GTVTNNEKIGQLVDPLALEVAFRVSTSQHRRLLDDAGKLRAAEVSVTLDLLGAEMSSSGQ
ITREAAVVGEGLTGRLLFASLATSKGLRPGDFVTVNITEPALNWVARLPATAVSGNNKVL
VVGEDERLSEADVTLVRRQGDDVLVRSRELNGAQIVAERSPLLGAGIKVRVLSAEGKAPQ
AAPETIALDPERRAKLIAFVEGNKRMPKQAKERVLAQLQEPEVRKELVERLEGRMGG
NT seq 1434 nt   +upstreamnt  +downstreamnt
atggggttgttcttactggcggcgactctggcgctgtttgcctatgccatcatgatggtt
cggggcgcgattgagaacaaaggtgacgatcagcggcgcggtggcggtggtcgtgagaga
gtttttgcagtgaatgccgtgccctttgagccgggccagcatattccggtcctacaggtc
tttggcgaggtgcaaagccagcgtagccttgatattcggccggcggttggcggaacggtc
attgagttgcacccgaattttcaaaatggcggttctgttttggagggcgatgtactcctg
agaattgatccgtcaaatgcacaaaccgccttggctttggtacaggccgatatggccgat
gctcaagcggatttgcgagaggcgatgcgggcgctagacttggccaaggatgagatcagc
gccgcgcaagagcaagccgccctgcgccaaaaagcattggcccggcaacaagatctcgtg
acccgtggggtcggcactgcggcctctgtggaggctgcggaactggctgcttcctcggca
cgccaatccgttctggcgcggcgccaagctttgcaggccgctgaggcgcgtttggatcaa
gcgcgtgcgcgggtcatgcgggtggatatttctttggcggaagcggagcgcaatgtgcgt
gacaccgttgtacgcgcggccttttctgggctgctggccaatgtcactgttctgcagggc
ggaactgtgaccaacaatgaaaaaattggtcaattggtggatccattggctctggaagtg
gcctttcgtgtgagtacctcccagcatcggcgactgctcgatgatgcgggcaagttgcgg
gctgctgaggtctcggtgacgctggatctgctcggcgcggagatgagctccagcggccag
atcacccgcgaagctgctgtcgtgggcgaaggtttgactgggcggttgctctttgccagc
cttgcaacctccaagggtctgcggccgggtgattttgtgactgtaaacataacggagccc
gccttgaattgggttgcccgcctgccggccacggccgtgagcgggaataacaaggttctg
gttgtgggcgaagatgagcgcctgtcggaggccgatgtgacccttgtgcgccgtcagggg
gatgatgttttggtgcgctcgcgtgagctgaacggagcgcaaattgtagcggaacgatcc
ccattgctgggtgcgggcatcaaggtgcgcgtgttgagcgctgagggaaaagcgccacag
gcggccccagagaccatcgcgcttgatccagagcggcgggccaagttgattgcctttgtc
gagggcaacaaacgcatgcccaaacaggccaaggagcgggtcttggcgcagttgcaagag
cccgaagtgcgcaaagaattggttgagcggctggaaggccggatggggggataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (40)   
   KEGG ORTHOLOGY (1)   
   RefGene (37)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (52)   

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